| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2678 |
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| Symbol | |
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| ID | 4604925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3205426 |
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| End bp | 3207153 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782089 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_928550 |
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| Protein GI | 119775810 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTGA TTAAACTTTT TTTACCTCTG CTGCGCCGCC AATGGCTGAT GATGTTTACC
GGTTTGTTGC TGGCCTTTAT TACACTGGTG GCCGGAATTG GCCTGTTGTC GCTGTCGGGC
TGGTTTTTGT CTGCTACCGC CGTTGCGGGG CTGAGCCTTG CCACGGCCCA GGCCTTTAAC
TTTTTCACCC CGGCGGGTGG GGTACGTTTT TTATCTATAG CCCGCACCGC GAGTCGTTAT
GGTGAGCGTC TTGCCACTCA CGAAGCCACC TTCAGACTGC TGACCGAGCT CAGGGTAAAG
GTGTGGCGGG CTTTGATGCC GCTGGCGGAC AAGGATTTGG CGGGACTCAG ACAGTCGGAA
CTCCTTAATC GCTTGGTTGC CGACATCGAC ACCCTTGACC ATCTGTACCT GCGCCTCCTG
GTGCCCATGG GGGCCTTTGT TGGGGTGCTG CTGGCGCTGT TTGCCTTTAT CGGATGGTTT
GACGCTCGCC TTTCCCTGCT GCTTTGTGGC GGTTTGCTGT TGGCGCTGTG TTGTATTCCC
CTCAGTTTTT ATCTGCTTGG GCGCAGCAGC GCTGTGGCAG TCGTCAATGA AAAGCGCCGC
TACCGGGTGC AGTCCCTGGA GTTTTTGGGC GGGCTGGCAG AGCTTTGGCT GTTTGGTGCC
CTGGACAAGT ATCGGCAGGA TTTGAATGCC ACAGAGCGGC AATGGCAAGA CTCGCAGCGT
GCCATGGCCG GGTTGCAGGG GCTATCACAG GCGGTGCTGG TGATGGTACA TGGCGTGCTC
ATCGTGTTGA TGTTGGTCAT GGCATCCAGT GGTGTTGGTG ACAGGGTTCC CCCTGGGCCT
TTGGCGGCCA TGGTGCTCTT TGCCAGTCTG GCAGTGATGG AAATGCTGAT GCCGCTGGCG
GGAGCATTCA GTCAGCTGGC GGGGTGTCTG GCCGCGGGCG ACAGGGTCAA TGACATTACC
GGCAAGCAAA GCACCATCGC ATTTGGTGAT AAAACGCAGC TGCCTGCCGG GGACATTATT
TTTGAGAATA TCGAGTTTGG TTATCAGGCA CAGGATCCGG TGTTGTCGCG TTTTTCGCTG
CATATTCGCC GGGGGAGCAG GGTTGCTGTG CTCGGCAAAA CCGGGGTGGG GAAATCCAGC
CTCTTTACCC TGCTGACCCG AGGCTACAAT CCCGACGCGG GGCGTATTCG GGTGGGTGAC
ACCGACATTC AGGAGGTCAC TGAAAAAGCG CTGCGTTCGG CCATTACCGT GGTAAGCCAG
CGGGTACATC TCTTTGCCGG CACCCTCAAA GACAACCTGG CCATGGCCTG TGAAACACTG
CCGACCGATG CGGCGCTGAT ACAGGTACTG GAGCGGGTAG GACTGGGTTA TTTGGCCCAA
AGCGACGATG GACTCAAGCT GTGGATAGGC GAGGGGGGCC GTTTGCTCTC GGGGGGAGAG
ACCCGCCGTA TTGGGATTGC CCGCGCGCTG TTGAAAGACA GCCCCATTTT ACTGCTGGAC
GAACCCACCG AAGGGCTCGA CAGACGTACC GAGCGGCAAA TGCTGGCGCT GCTGTTTGAG
CATGCCAAAG ACAAAACGCT GGTGATGATA AGCCACAGAC TGACTGCCAT GACAGAAATG
GACGCTATCC ATATCCTGGA AAATGGCCGT GTTCGCGCCA GTGGCAGCCA CGAGACATTG
GTGGCGCAGC ATCCAGAGTA CCGGGCGCTG TCCCTTAGCC GTGAGTAA
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| Protein sequence | MNLIKLFLPL LRRQWLMMFT GLLLAFITLV AGIGLLSLSG WFLSATAVAG LSLATAQAFN
FFTPAGGVRF LSIARTASRY GERLATHEAT FRLLTELRVK VWRALMPLAD KDLAGLRQSE
LLNRLVADID TLDHLYLRLL VPMGAFVGVL LALFAFIGWF DARLSLLLCG GLLLALCCIP
LSFYLLGRSS AVAVVNEKRR YRVQSLEFLG GLAELWLFGA LDKYRQDLNA TERQWQDSQR
AMAGLQGLSQ AVLVMVHGVL IVLMLVMASS GVGDRVPPGP LAAMVLFASL AVMEMLMPLA
GAFSQLAGCL AAGDRVNDIT GKQSTIAFGD KTQLPAGDII FENIEFGYQA QDPVLSRFSL
HIRRGSRVAV LGKTGVGKSS LFTLLTRGYN PDAGRIRVGD TDIQEVTEKA LRSAITVVSQ
RVHLFAGTLK DNLAMACETL PTDAALIQVL ERVGLGYLAQ SDDGLKLWIG EGGRLLSGGE
TRRIGIARAL LKDSPILLLD EPTEGLDRRT ERQMLALLFE HAKDKTLVMI SHRLTAMTEM
DAIHILENGR VRASGSHETL VAQHPEYRAL SLSRE
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