| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2657 |
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| Symbol | |
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| ID | 4604904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3181222 |
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| End bp | 3182043 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782068 |
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| Product | ApbE family protein, putative |
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| Protein accession | YP_928529 |
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| Protein GI | 119775789 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00549568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCGCC GCGCCAAACC CATGCTGGGC ACCCTGACCG ACATCAGGGT AACAGACCCC
GGCCATGCCG ATGCCCAAGA GGCCATGACT GCCGCCTTTC GGCTAATGGG CGAGATAGAC
ACGAGCCTGT CGTTTCATCG GCCGATGAGT ACACTTTCGG CCCTCAACGC CCGTCCGATG
CAATGGACCG AGATGGGCAA ACATGGGGCC AGGATACTCA GGCTCGCCAG GGTGCTGGGC
AAGTTGAGCG ATAACCGCTT CAATGTGACC CTGGGTGGTG CTCTGGTCAA TGCCAGTGCC
CTGCCACGCC ATACACTGAG TGATTTTTTA CCCTGTGGCA GCTGGGAAGA CATTGAGATA
AACGGCACCC GGGCAAGGCT TAAACGGCCG GTGCTGCTAA CCCTGGATGG CATTGCCAAG
GGCTACGCGG TTGACATGGC AGTAAGCTGC CTTAAACGCT TTGGAGTGCG CTCAGGCTCG
GTCAATGCCG GGGGCGATCT TAAAGTGTTC GGCAACCACC CCATCAAGGT GCAGCTGAGA
AACAGCCAGG GCTTTACCGA CACCCTGTGG CTTAAGAATG CCGCACTGGC AAGCTCAAGG
CTCGGTGGAG AGCCGGATGC GCGCTTCTCA TCGCTTATCA TAAGCCAGGA TGGTTACCCG
GATAATTCCC CGCAGACCGA GTCCCTGCTA TCTGTCATAG CCCCTTTTGC CTGGCGCGCC
GATGCGCTTA CTAAGGTTTT GGCATTTGCC GGTCCGGAGA TGGTGACTCG CCTCGGCGGA
CGTCTTCCGT CCCTGGCCTC ACCCCCTGAC ACCGAACTCT GA
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| Protein sequence | MLRRAKPMLG TLTDIRVTDP GHADAQEAMT AAFRLMGEID TSLSFHRPMS TLSALNARPM
QWTEMGKHGA RILRLARVLG KLSDNRFNVT LGGALVNASA LPRHTLSDFL PCGSWEDIEI
NGTRARLKRP VLLTLDGIAK GYAVDMAVSC LKRFGVRSGS VNAGGDLKVF GNHPIKVQLR
NSQGFTDTLW LKNAALASSR LGGEPDARFS SLIISQDGYP DNSPQTESLL SVIAPFAWRA
DALTKVLAFA GPEMVTRLGG RLPSLASPPD TEL
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