| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2647 |
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| Symbol | |
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| ID | 4604894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3171264 |
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| End bp | 3172571 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782058 |
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| Product | oxidoreductase |
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| Protein accession | YP_928519 |
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| Protein GI | 119775779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA AATCTCCCAT CCACAGCGAT AAGTACCCGG ATTCATTCTA TTTTGCGACC
GCAAAAGAGT TATTTCAGTA TCCTGTACTG GACAGTGCCA TCGAGGTGGA CGTCTGTGTA
GTGGGGGGAG GGTTCAGTGG GCTCAACACC GCTATCGAGC TGCGCCAAAA AGGCTTCAAC
GTTGCGCTGC TTGAGGCCAA GCGTGTGGGC TGGGGAGCCT CGGGGCGCAA CGGGGGTGAG
CTTATTCGTG GTATCGGCCA TGGACTCGAG CAATTTCACA ACACCATTGG TCAGGAAGGC
ATTGATGCCA TTACCCAAAT GGGGTTTGAG GCGGTTGAAA TAGTCCGAAA GCGGATTGCC
GACCACAATA TCGACTGTGA CCTGGCCATG GGCTATTGCG ACCTGGCGGT GAAACCTCGG
CATATGGCTG AGCTTGCTGA AGAGTTCGAA CATCTGAAAA CAGCGGGTTA TCGTCAGGAC
ATCAAACTGC TGCAAAAGGC AGACTTATGC GACGTCATAG GTTCTGACTG TTATCAGGGC
GCCCTGGTTG ACATGGGCAG TGGCCATTTG CATCCATTGA ACTTGGCCTT GGGCGAAGCC
AGAGTTGCCC GGGAGCTCGG CGTGCAGATT TTTGAATACA GCGCCGCCAC CAACATTATC
AAGGGAGACA AGCCCAGAGT CATCACGGAA AAAGGTGAAG TGAACTGTCG CTATCTGGTG
CTGGCAGGCA ACGCCTACAT AGGCCACAAA CTCGAGCCTT ACGTGGGGGG CAAGGTATTG
CCAGCAGGCA GCTATCTCTT GGCTACCGAA CCCTTAAGCC CAGAACTGCA GCGCGAAATC
ATCCCCCAAA ATATGGCCTT TGCCGACATG CGCATTGCAC TGGATTATTT TCATCTCTCC
GCCGATGGGC GCTTGCTTTT TGGTGGCCTG TGCACCTATT CAGGCAAAGA TCCCAGCGAT
ATAGAAGCTG CGCTCAGGCC CAATCTGGAA CGGGTATTTC CCAAACTCAA GGGTGTGCGC
ATCGATTATC AATGGGGCGG CATGATAGGG ATCGGTGCCA ACCGCTTACC TCAGCTGGGG
CGCCTGCCGG ACGCGCCCAA CATCTTCTTT GCTCAGGCTT ACTCGGGCCA TGGCGTCAAC
GCGACGCATA TGATGGCAAA GCTGCTTGCT GAGGCGATAG CAGGCCAGGC AGAACGTTTT
GATGTATTTG CCAAGGTGAA ACACATGACC TTCCCCGGAG GCCCTGCACT GCGCTCACCG
CTGCTGGCAG CCGGCATGCT GTATCACCGC TTTATGGATA TTTTTTAA
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| Protein sequence | MANKSPIHSD KYPDSFYFAT AKELFQYPVL DSAIEVDVCV VGGGFSGLNT AIELRQKGFN
VALLEAKRVG WGASGRNGGE LIRGIGHGLE QFHNTIGQEG IDAITQMGFE AVEIVRKRIA
DHNIDCDLAM GYCDLAVKPR HMAELAEEFE HLKTAGYRQD IKLLQKADLC DVIGSDCYQG
ALVDMGSGHL HPLNLALGEA RVARELGVQI FEYSAATNII KGDKPRVITE KGEVNCRYLV
LAGNAYIGHK LEPYVGGKVL PAGSYLLATE PLSPELQREI IPQNMAFADM RIALDYFHLS
ADGRLLFGGL CTYSGKDPSD IEAALRPNLE RVFPKLKGVR IDYQWGGMIG IGANRLPQLG
RLPDAPNIFF AQAYSGHGVN ATHMMAKLLA EAIAGQAERF DVFAKVKHMT FPGGPALRSP
LLAAGMLYHR FMDIF
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