| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2639 |
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| Symbol | |
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| ID | 4604886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3162181 |
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| End bp | 3162996 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782050 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_928511 |
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| Protein GI | 119775771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0166478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGAGTTTTTC TACCGTGATG TTGTGGTTGG GGCTCATCTT CCTCTATGCC
CCCATGTTTA TCCTGATTTT CTACTCCTTC AACGCGTCCA AACTGGTGAC CGTGTGGGGT
GGATTCTCGG CCAAATGGTA TGTGGAGCTG TTCAAGGATC AGCAAATCCT TGATGCGGTC
TGGACCAGTT TGGAAATTGC CTTCCTGTCG GCCTCCATGG CCGTCGTGTT GGGTACCATG
GCGGCGTTCG TGATGACACG TTTCCGTCGC AGCTGGGCCA AGCTGTCGCT GTCAAACATG
ATAACGGCGC CACTGGTTAT GCCTGAGGTG ATTACGGGTC TGTCTTTGCT GCTGCTGTTT
GTGCACATGG CTGACCTGAT TGGCTGGCCT GCCGAGCGCG GTAGACTCAC CATTTGGCTG
GCGCATTCCA CCTTCTGTGC CGCCTACGTG GCTGTGGTGG TGTCGTCCCG TCTGCGTGAA
CTGGACATGT CGATTGAGGA AGCCGCTATG GATCTGGGTG CAACGCCACT CAAGACCTTC
TTCCTTATCA CTGTTCCCAT GATTGCGCCG GCACTGACCG CAGGTTGGCT GCTGTCATTC
AGCCTGTCTC TGGATGATTT GGTGATTGCG AGCTTTGCGT CGGGCCCGGG GGCAACGACG
CTGCCGATGG TAGTGTTCTC GTCGGTGCGT TTGGGGGTAT CTCCCAAGAT TAACGCGCTG
GCAACACTCA TCATTCTCGC GGTGTCACTG ATTGCATTCC TGTCCTGGTA TTTTGCCCGC
AGGGCAGAAA AGCGCGCAAA GGCAGCGATG GAGTAG
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| Protein sequence | MKKLSFSTVM LWLGLIFLYA PMFILIFYSF NASKLVTVWG GFSAKWYVEL FKDQQILDAV
WTSLEIAFLS ASMAVVLGTM AAFVMTRFRR SWAKLSLSNM ITAPLVMPEV ITGLSLLLLF
VHMADLIGWP AERGRLTIWL AHSTFCAAYV AVVVSSRLRE LDMSIEEAAM DLGATPLKTF
FLITVPMIAP ALTAGWLLSF SLSLDDLVIA SFASGPGATT LPMVVFSSVR LGVSPKINAL
ATLIILAVSL IAFLSWYFAR RAEKRAKAAM E
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