| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2638 |
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| Symbol | |
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| ID | 4604885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3160726 |
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| End bp | 3162012 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782049 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_928510 |
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| Protein GI | 119775770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000755871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTA CACCTCATAC CGAGTCCTAC TATGCCGCTT CCGCCAATGA CACCCGCATT
CGTCCTCGTC TTGAGGAGCA TCTTGAAACC GACGTGTGTG TTATAGGCGC AGGCTATACG
GGTCTGTCCT CGGCATTGCA TTTGCTTGAA AGTGGTTTCA AGGTCGTGGT TTTGGAGGCT
GCCCGAATTG GTTGGGGCGC CTCGGGTCGC AATGGCGGCC AAATCGTTAA CAGCTATAGC
CGAGACATTG ATGTCATTGA AAAAACCGTT GGCAAGGAAA AGGGCAAGCT GTTCGGTGAA
ATGGCATTTG AAGGCGGTCG CATCATTCGC GATCGCATCG CAAAATATAA TATCGACTGC
GACCTGAAAA ACGGCGGTGT GTTTGCCGCA CTCAACCAGA AGCAGATGGG CCACCTCAAA
GCGCAAAAAG CGCTGTGGGA AGCTCACGGT CATACCAATC AGCTGGAAAT CCTCGATGAA
GCCGGTATCC GTAATGTGGT GAATACTGAA CGTTACGTCG GCGGTATGCT GGATAAGAGC
GGTGGTCACA TTCATCCGTT GAATTTGGCG CTGGGCGAAG CCCGTGCGGT GGAAAGCCTC
GGCGGTAAAA TCTTTGAAGA CTCAGCCGTG CTCGATGTAG TGGAAGGCGA GCCTGCTATT
GTCAAAACCG AGTTCGGTCA GGTGAAGGCC CGTTTTGTGG TGGTGGCCGG TAATGCTTAC
CTTGGCAAGC TGATGCCTGA GCTGATGGCC AAGTCCATGC CCTGCGGCAC CCAGGTGATT
ACCACCGAGC CCCTGAGCGA TGAGATGGCA AATAGCCTGC TGCCACAGGA CTACTGTGTT
GAAGACTGTA ACTACCTGCT GGACTATTTC CGCCTCTCCG GCGACAAGCG TCTGATTTAC
GGTGGTGGCG TGGTGTATGG CGCCCGCGAC CCGGACAACA TCAAGTCCAT TATTCTGCCG
AAAATGCTGG AGACTTTCCC GCAGCTTAAA GGTGTGCGTA TCGACTACAC CTGGACGGGT
AACTTCCTGC TGACCCTGTC GCGTCTGCCT CAGGTCGGCC GTATTGGCAA GAACATCTAT
TACTCCCAGG GCTGCAGTGG CCACGGTGTA ACCTACACCC ATCTGGCGGG CAAACTCATT
GCCGAGGTGC TTAATGGTCA GGCTACCCGC TTCGATGTCT TTGCTGAACT GCCCCATTAT
CCGTTCCCGG GTGGCCACGC GCTGCGGGTG CCATTCAGTG CCATCGGTGC CTGGTATTAC
ACCATGCGTG ACAAGCTTGG CATTTAA
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| Protein sequence | MSATPHTESY YAASANDTRI RPRLEEHLET DVCVIGAGYT GLSSALHLLE SGFKVVVLEA
ARIGWGASGR NGGQIVNSYS RDIDVIEKTV GKEKGKLFGE MAFEGGRIIR DRIAKYNIDC
DLKNGGVFAA LNQKQMGHLK AQKALWEAHG HTNQLEILDE AGIRNVVNTE RYVGGMLDKS
GGHIHPLNLA LGEARAVESL GGKIFEDSAV LDVVEGEPAI VKTEFGQVKA RFVVVAGNAY
LGKLMPELMA KSMPCGTQVI TTEPLSDEMA NSLLPQDYCV EDCNYLLDYF RLSGDKRLIY
GGGVVYGARD PDNIKSIILP KMLETFPQLK GVRIDYTWTG NFLLTLSRLP QVGRIGKNIY
YSQGCSGHGV TYTHLAGKLI AEVLNGQATR FDVFAELPHY PFPGGHALRV PFSAIGAWYY
TMRDKLGI
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