| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2636 |
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| Symbol | |
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| ID | 4604883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3157929 |
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| End bp | 3159206 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782047 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_928508 |
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| Protein GI | 119775768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGA CCAATGATTC ATTGATGGTT CGTCGCCGCG CTGCTGTGGC CGGTGGCGTT
GGCCAAATCC ACCCTGTGTT TACCGAGCGA GCCGAGAACG CCACCGTATG GGATGTGGAA
GGTCGCGAAT ATATCGACTT TGCCGGCGGC ATCGCGGTGC TGAACACAGG TCACCTGCAT
CCGAAAGTAA AGGCGGCTGT CGCCGAGCAG CTGGAGAAGT TTTCCCACAC CTGTTTTATG
GTGCTGGGCT ATGAAAGTTA TGTGGCCGTG TGTGAAAAGC TGAACCAACT GGTGCCCGGC
GACTTTGCCA AGAAGTCGGC ACTTTTTACC AGTGGCTCGG AAGCGGTGGA AAACGCCATT
AAGGTGGCTC GCGCCTACAC CAAGCGTGCA GGGGTGATTG CCTTTACCTC TGGCTACCAT
GGCCGCACCA TGGCAGCACT GGCCCTGACC GGTAAAGTGG CCCCCTACAG TAAGGGCATG
GGACTGATGC AGGCCAACGT GTTTCGCGCC GAGTTCCCCT GCGCGCTGCA CGGGGTGAGC
GAAGATGATG CCATGGCCTC CATCGAGCGC ATTTTCAAGA ACGACGCCGA GCCAAGCGAT
ATTGCAGCCA TTATCCTGGA ACCAGTGCAA GGCGAGGGCG GTTTCTATGC CGCGACACCA
GGCTTTATGA AGCGTCTGCG CGAGCTTTGC GACCGGGAAG GCATCATGCT GATTGCCGAT
GAAGTGCAGA CCGGCGCTGG CCGCACCGGC ACCTTCTTTG CCATGGAACA GATGGGCGTG
GCGGCTGATA TTACTACTTT TGCAAAGTCG ATTGCTGGTG GCTTCCCACT GTCTGGTATC
ACCGGCCGCG CCGAGGTGAT GGACGCCATT GGCCCCGGTG GCCTTGGCGG CACGTACGGC
GGTAGCCCGC TTGCCTGCGC CGCAGCGCTG GCCGTGATTG AAGTCTTTGA AGAGGAAAAA
CTCCTGGAGC GCTCCAACGC CATCGGTCAG ACCATCAAGT CTGCCATCGG TGAGCTGGCC
AGCCGGTATC CGCAAATCGC CGAGGTGCGT GGTCTGGGCT CCATGATTGC CATTGAGCTG
ATGGAAAACG GTAAGCCTGC GCCTGAGTAT TGCCCACAGG TGCTCACCGA GGCTCGCAAT
CGCGGCCTTA TCCTGCTGTC GTGCGGAACT TACGGCAACG TGCTGCGGAT TTTGGTGCCC
ATTACGGCTC CGGATGAACA AATCCAGCGC GGACTTGAAA TCATGGCCGA ATGCTTTGAG
GCCGTACTGG GTAAATAA
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| Protein sequence | MSLTNDSLMV RRRAAVAGGV GQIHPVFTER AENATVWDVE GREYIDFAGG IAVLNTGHLH
PKVKAAVAEQ LEKFSHTCFM VLGYESYVAV CEKLNQLVPG DFAKKSALFT SGSEAVENAI
KVARAYTKRA GVIAFTSGYH GRTMAALALT GKVAPYSKGM GLMQANVFRA EFPCALHGVS
EDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAATP GFMKRLRELC DREGIMLIAD
EVQTGAGRTG TFFAMEQMGV AADITTFAKS IAGGFPLSGI TGRAEVMDAI GPGGLGGTYG
GSPLACAAAL AVIEVFEEEK LLERSNAIGQ TIKSAIGELA SRYPQIAEVR GLGSMIAIEL
MENGKPAPEY CPQVLTEARN RGLILLSCGT YGNVLRILVP ITAPDEQIQR GLEIMAECFE
AVLGK
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