| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2621 |
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| Symbol | |
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| ID | 4604868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3138612 |
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| End bp | 3140300 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782032 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_928493 |
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| Protein GI | 119775753 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.898165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA ACAAACGCCC GCTCTATTTG CCGTTCGCCG GTCCAGCCAT TCTTGAAGCA
CCGCTCATTA ACAAAGGCAG CGCCTTTACC GAAGAAGAGC GGATATTCTT CAACCTTGAA
GGCCTGTTAC CTTACGCGAT TGAAACCATC GAAGAGCAGG CATCAAGGGC CTACGATCAG
TTCCGCAGTT TCAACAATGA TTTGGATAAG CACATCTACC TGCGCAACAT TCAGGACACC
AACGAAACCC TGTTTTACCG CCTGGTGCAA AACAACATTG CCGAGATGAT GCCCATCATC
TACACCCCCA CGGTGGGCCT GGCCTGTGAG CGGTTCTCCA AAAACTATCG CCGCAACCGC
GGACTGTTTA TCTCCTATCC CAACAAGGAC AGGATTGACG ACATCCTCAA TAACTCCACC
CGCCACAAGG TGAAAATCAT CGTTGTGACG GACGGCGAGC GGATTCTGGG TCTGGGCGAT
CAGGGGATTG GCGGCATGGG CATCCCAATT GGAAAGCTGT CACTGTACAC CAGCTGCGGT
GGTATCAGCC CGGCCTATAC CCTGCCTATC ACCCTGGATG TGGGCACTGA CAATCCGCAC
CTGCTCGAAG ACCCCATGTA CATGGGCTGG CGCCATCCCC GCATTGGTGG CGAAGAGTAC
AGCGAGTTTA TTGAAGCCTT TATGGAAGCC GTACACCGCC GCTGGCCTGA TGTGCTGATT
CAGTTTGAAG ACTTTGCCCA GAAGAATGCC ATGCCAATTC TGGAGCGCTA CAAGGACAGA
TACTGCTGTT TTAACGACGA TATTCAAGGT ACGGCTGCGG TGACCGTTGG CTCCTTATTG
GCCGCCTGCC AGGCCGCTGG AACCAAGCTC AGTGATCAGC GCATCACCTT CCTGGGTGCA
GGCAGCGCCG GTTGCGGTAT TGCTGAAGCA ATTGTGGCGC AAATGGTATC TGAAGGCATC
AGCGATGATC AGGCCCGCAG CCAGGTGTTT ATGGTTGACC GCTGGGGTCT GCTGCTGGAC
AACATGCCTA ACCTGCTGCC ATTCCAGCAA AAACTGGCAC AGAAAATTGA TAACATTAAC
CACTGGGATG ACTTCAGCGA CAATGTCTCA CTGCTGAACG TCGTGAACAA TGCCAAGCCG
ACGGTACTTA TCGGCGTGTC AGGCGCCCCT GGCCTCTTTA CTGAAGAGAT CATCCGCGCC
ATGCACAGCC ACTGCGCCCG TCCAATCGTA TTCCCGCTGT CCAACCCCAC CAGCAGGGTT
GAGGCGACAC CGAAAGATAT ACTCCACTGG ACCAGCGGTC AGGCGTTGGT AGCAACCGGT
AGCCCGTTCG AGCCCGTGGT AGTGGACGAC GTGACTTACG ATATCGCCCA GTGCAACAAC
AGCTACATCT TCCCCGGCAT TGGTCTTGGG GTGCTGGCGT GCGGAGCCAA CCGGGTATCA
AACGAGATGC TCATGGCCTC CAGCCGCGCG CTTGCGGAGT GTTCTCCATT GGCAAAAGAC
GGCTCAGGAC CTCTGCTGCC ACCGCTGGAA GAAATTCACG ATGTAAGCAA ACACATCGCC
TTTGCCGTTG CCAAGGTGGC CATTGAACAG GGACATGCGC TGGATACCAC TGATGAGCTG
CTGATGCAGT CCATCGAGGC CAACTTCTGG TATCCCGAGT ACCGCCGTTA CAAACGGACC
TCGTTCTAA
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| Protein sequence | MDDNKRPLYL PFAGPAILEA PLINKGSAFT EEERIFFNLE GLLPYAIETI EEQASRAYDQ
FRSFNNDLDK HIYLRNIQDT NETLFYRLVQ NNIAEMMPII YTPTVGLACE RFSKNYRRNR
GLFISYPNKD RIDDILNNST RHKVKIIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG
GISPAYTLPI TLDVGTDNPH LLEDPMYMGW RHPRIGGEEY SEFIEAFMEA VHRRWPDVLI
QFEDFAQKNA MPILERYKDR YCCFNDDIQG TAAVTVGSLL AACQAAGTKL SDQRITFLGA
GSAGCGIAEA IVAQMVSEGI SDDQARSQVF MVDRWGLLLD NMPNLLPFQQ KLAQKIDNIN
HWDDFSDNVS LLNVVNNAKP TVLIGVSGAP GLFTEEIIRA MHSHCARPIV FPLSNPTSRV
EATPKDILHW TSGQALVATG SPFEPVVVDD VTYDIAQCNN SYIFPGIGLG VLACGANRVS
NEMLMASSRA LAECSPLAKD GSGPLLPPLE EIHDVSKHIA FAVAKVAIEQ GHALDTTDEL
LMQSIEANFW YPEYRRYKRT SF
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