| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2620 |
|---|
| Symbol | |
|---|
| ID | 4604867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 3137841 |
|---|
| End bp | 3138308 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639782031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928492 |
|---|
| Protein GI | 119775752 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4807] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.481064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.297004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA CAAACAACGA TATTCTGCGC CGCCTGCGCT TTGCCCTGAA TCTGAGTGAC
AGCAAGGTTG TCGCTCTCTT CGCCCTGGTC CATCAACCGA TAACCGAAGA TGCCCTGCTC
GCCATGCTGA AAAAGGAAGA TGAACCCGGT TTTCGTCCCT GCACCGACAA GGAACTCTGC
CAGTTCCTGG ATGGTTTGGT TATTGAGCGC CGCGGACTGA GACCAGGTGA CGGTGTGCCT
GCGCCGATGC CACTGGATAA TAATCTGGTA TTCAAAAAGA TCCGCATTGC ACTGGAGCTG
AAGGAAGATG ACATCCTGGC CATGCTAACC AAGGCCGGAT TCGCTCTCTC CAAGTCGGAA
CTGGGCGCCA TTTTCAGAAA CCCGGACCAC CGCCATTATC GTCCCTGTGG CAATCAGTTG
TTGCGCAACT TTTTGAAGGG CCTGTCCATC AGCCTCCGCG GTCGCTGA
|
|---|
| Protein sequence | MPMTNNDILR RLRFALNLSD SKVVALFALV HQPITEDALL AMLKKEDEPG FRPCTDKELC
QFLDGLVIER RGLRPGDGVP APMPLDNNLV FKKIRIALEL KEDDILAMLT KAGFALSKSE
LGAIFRNPDH RHYRPCGNQL LRNFLKGLSI SLRGR
|
|---|
| |