| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2611 |
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| Symbol | |
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| ID | 4604858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3127773 |
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| End bp | 3128327 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782022 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_928483 |
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| Protein GI | 119775743 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCA AGGTGCTCCC AATACCACAG CAGCAATCAC AAGATGTGAA TGATGCCAGC
CTGGCGCAGC AAGCGGCACA GGGCGATAAA AGCGCCTTTG AAGCCCTGTA CCAACGCCAC
CATAAACGGA TCTACGCGCT GGCGCTGCGT CTTGGCGGCG AACCGAGTCT TGCCGATGAA
ATATTGCAGG AAAGCTTTGT TCGTCTGTGG CACAAGCTGC CGCAGTTTCG TGGTGAGAGC
CAATTTGGCA CCTGGTTTTA CTCGCTGGCC CTGAATCAGG CACTAAGCAC CCTCAAGCAA
CATCGCAGCT TTTGGGCCCG AATGGTGCCC GACTGGCAAA TACAGGATGC ACCAGAGCAC
AGTCAAAATG ACGATGGTCT CCTGCTCGAC CGCCTGATTG TCAGGCTGCC GGAGCGAGCC
CGGCTGGTGT TTGTTCTATT TGCCGTGGAA GGTTTTTCCC ACGAGGAAGT GGCCAGTTTG
CTCGGTATAT CCACCGGCAC CAGCAAGGCA CATTACCACA GGGCGCGGGA ACTGATGAAG
GAGATGCTGT CATGA
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| Protein sequence | MEPKVLPIPQ QQSQDVNDAS LAQQAAQGDK SAFEALYQRH HKRIYALALR LGGEPSLADE
ILQESFVRLW HKLPQFRGES QFGTWFYSLA LNQALSTLKQ HRSFWARMVP DWQIQDAPEH
SQNDDGLLLD RLIVRLPERA RLVFVLFAVE GFSHEEVASL LGISTGTSKA HYHRARELMK
EMLS
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