Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2600 |
Symbol | |
ID | 4606013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3112729 |
End bp | 3113580 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639782007 |
Product | CDP-diacylglycerol--serine O-phosphatidyltransferase |
Protein accession | YP_928472 |
Protein GI | 119775732 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1183] Phosphatidylserine synthase |
TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000101505 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATA TTGACAAGCC AACAGTAAAA AATCGCGGTA TCTATTTGCT GCCTAACCTT TTTACCACTG CCGGATTGTT TTCTGGCTTC TACGCCGTAA TCGCGTCCAT GAATGGCCAA TTTGAATCTG CAGCCATTGC AGTGTTTGTC GCCATGCTGT GCGATGGGCT CGATGGCAGA GTGGCAAGGT TAACCAATAC CCAGAGTGAA TTTGGCGCCG AGTACGACAG CATGGCCGAT ATGGTGTCAT TCGGAATGGC ACCGGCACTG ATAGCCTATA ACTGGGCGCT GTCAGACCTT GGCAAAATTG GATGGCTCGC TGCCTTTATA TACTGTGCCG GGGCGGCGTT ACGTCTTGCC AGGTTTAATA CGCAGGTTGG TGTCGCAGAC AAACGATGGT TTCAGGGGCT GGCAAGCCCG GCTGCGGCGG CCGTGATCGC TGGGACTGTG TGGCTTGGAA ACCAATATCG CATTGAAGCA GACTCAGTGA GCTATCTGTT CGCCGTGGTT ACCATCTGCA CAGGGCTACT GATGGTCAGT AACTTCCGTT ATCACTCCTT TAAAGAAGTC GACTGGCGTG GCAAGGTCAA CTTTATCGTT ATCCTGTTGG TGGTCGGGGT CTTTGTAGTG ATCTCGGTAG AACCTGCATT AATCCTGTGT CTGGGTTTTT ATCTTTATGC GTTGTCTGGC CCAGTGATTA CCGTCCGTTC GGTACGTAAG CTTAAGGTTT CTCATGTGGT CGGCGACGAT GAAGACGAGC ATGAGCAGGG ATACTCGCAG GACTCTCCGG ATAACCAAGT AAAAGCGCAA GCTGACAAAG GGGAATTCGA TAAATCAGCG AAAGACGATT AA
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Protein sequence | MQNIDKPTVK NRGIYLLPNL FTTAGLFSGF YAVIASMNGQ FESAAIAVFV AMLCDGLDGR VARLTNTQSE FGAEYDSMAD MVSFGMAPAL IAYNWALSDL GKIGWLAAFI YCAGAALRLA RFNTQVGVAD KRWFQGLASP AAAAVIAGTV WLGNQYRIEA DSVSYLFAVV TICTGLLMVS NFRYHSFKEV DWRGKVNFIV ILLVVGVFVV ISVEPALILC LGFYLYALSG PVITVRSVRK LKVSHVVGDD EDEHEQGYSQ DSPDNQVKAQ ADKGEFDKSA KDD
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