Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2592 |
Symbol | |
ID | 4604839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3100253 |
End bp | 3101431 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781993 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_928464 |
Protein GI | 119775724 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000836445 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.819629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAAAG TAATCAAACC TAGCGCCCCA AAATCGATGT TGCTCCTGGC CATTATGTCT GCCAGCGCCT TTGCAGCACC ACCGACCGTC GTTCCAGATG CCCCTTCCGT GGCCGCCAAA GCTTATGTGT TGATGGATTA TCACACCGGC CAGATCATTG CTGAAGAACA TGCTTATGAG CAGCTGAATC CGGCCAGCCT TACCAAGATG ATGACCAGCT ATGTGATTGG TCATGAAATG AAAGTGGGCA ACATCTCACC GGAAGATGAC GTCACCATCA CCAAAAACGC CTGGTCAAAG AACTTTCCCG ATTCCTCAAA GATGTTCATC GAGGTAGGCA AAACAGTAAA AGCCGCCGAT TTGAACCGTG GCATCATCAT CCAGTCCGGT AACGACGCCT GTGTGGCCAT GGCTGAGCAC ATTGCCGGTA CCGAAGATGC TTTCGTTGAT ATGATGAACT CCTGGGCGAA GCAACTCGGT ATGACCGACA GCTACTTTGA AAACAGCCAC GGTCTGGACT CTGACAACCA CAAAACCACC GCCTATGACA TGGCCATTCT GGGTGCCGCC CTTATCCGTG ACGTGCCGGA AGAGTACCGC ATCTATTCCG AAAAAGAGTT CACCTTTAAC GGTATCAAGC AATACAACCG TAACGGCCTC TTATGGGACA AGAGCATGAA CGTGGACGGT ATCAAGACTG GCCACACCTC TGGCGCGGGT TATAACCTGG TGGCCTCTGC CACACAGGAC GACATGCGTT TGATTTCTGT GGTCATGGGC GCCAGCAGCG AGGCTTCCCG TAAGGCCGAA AGCAAAAAGC TACTGTCCTA TGGTTTCCGC TTCTTCGAAA CCGTCACCCC CTACAAGGCC GGTGACAGCT TCGTAAATCA ACAAATTTGG TATGGCGATC GTGAAAGTGT CGACCTGGGC GTCGCTACCG ACACTCCTCT GACCATTCGT CGCGGCAAAG GCAAAGAACT TCAGGCCAAC TTCGAACTGA CCAAGCCATT GGAAGCTCCA CTGGCCAAAG GCGAAGTAGT GGGCCGCGTG TATTTCCAGT TGGATGGCAA AGACATAGCA CAATTCCCGC TGGTAACACT GCAGGAAGTG AATGAAGGCA GCTGGTTCTC CAAGCTGATG GATTACTTCA AGCAGCTCGT CGCCAGCTGG CTGAGCTAA
|
Protein sequence | MMKVIKPSAP KSMLLLAIMS ASAFAAPPTV VPDAPSVAAK AYVLMDYHTG QIIAEEHAYE QLNPASLTKM MTSYVIGHEM KVGNISPEDD VTITKNAWSK NFPDSSKMFI EVGKTVKAAD LNRGIIIQSG NDACVAMAEH IAGTEDAFVD MMNSWAKQLG MTDSYFENSH GLDSDNHKTT AYDMAILGAA LIRDVPEEYR IYSEKEFTFN GIKQYNRNGL LWDKSMNVDG IKTGHTSGAG YNLVASATQD DMRLISVVMG ASSEASRKAE SKKLLSYGFR FFETVTPYKA GDSFVNQQIW YGDRESVDLG VATDTPLTIR RGKGKELQAN FELTKPLEAP LAKGEVVGRV YFQLDGKDIA QFPLVTLQEV NEGSWFSKLM DYFKQLVASW LS
|
| |