| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2590 |
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| Symbol | |
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| ID | 4604837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3098349 |
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| End bp | 3099338 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781991 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_928462 |
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| Protein GI | 119775722 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.164218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.320646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTG CCCCAGGCCT GGCCTTGTTG TCAGGCCTTC TTGCCGCCAA TCTTGTGCTC
GCTGCCGAGA CACAAATCGA CACTGCCAGG GACAGTTTTA TTTCCCGCCA GAGTGCACTT
GGCTTTTCCC AATCTCAAAT CGATGCATTT CTGGCCGGCG CCCAATATAA CCCCAAGGTG
ATTGAAGCCA TCAGCCGCCC CTGGGAAGCC AAACCCTGGC ATCTCTACCG ACCACGCTTT
CTCACCGAGA CGAGGCTCAA GGCAGGGCTC GAGTTCTGGC GAACTCACGA GAGCACCATC
GACAGGGCAT CGACGCAGTT TGGCGTTGAG CCGGAGATGA TTGTGGCCAT TATCGGCATC
GAAACCCATT ACGGCCAAAC CATGGGTAAC TACAGTGTGC GCGATGCCCT CTACACCCTT
GGGTTTTACT ACCCACCCAG GGCCAGTTTT TTTCTTAAAG AATTGGGCGA GCTTCAAAAA
CTTGAGCAGG AAGAAAAACT CGATGTGAGC GCATTGAAAG GCTCCTACGC CGGTGCCATA
GGGTTTGGAC AGTTTATGCC CTCCAGCTAC CGCTACTATG GGGTCGATTT TGACGGTGAT
GGCCGCAAAG ACTTGCTCGG CAGCCCCGCC GATGCCATCG GCAGTGTGGC CAATTATTTT
CATCAACATG GCTGGCAAAC CGGTGACCCT GTCGCGTTTC GCTTGGAAAG CTACGGAGAA
ACACCGCCGA CAGCCTCGCT CTGGCAGGGA GAGCCGTTAA CCCTCAAGGC ATCCGATATA
CTCGCAGACG GCTTCGGCCT TGCGGACAAA CGGGATCTGG ATGTTGCCCG GCCTGCAATG
CTGTTTAAAC TGGAGCAGGA AACTCACAAC GAATACTGGA TGGGTTTTAA GAATTTTTTC
GTAATCACCC GTTATAATCG CAGCCCTCTT TACGCCATGG CGGCCTATGA ATTCAGTGAG
CAGCTTAAAC ATGCGCATGC CAAGTATTAA
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| Protein sequence | MSFAPGLALL SGLLAANLVL AAETQIDTAR DSFISRQSAL GFSQSQIDAF LAGAQYNPKV
IEAISRPWEA KPWHLYRPRF LTETRLKAGL EFWRTHESTI DRASTQFGVE PEMIVAIIGI
ETHYGQTMGN YSVRDALYTL GFYYPPRASF FLKELGELQK LEQEEKLDVS ALKGSYAGAI
GFGQFMPSSY RYYGVDFDGD GRKDLLGSPA DAIGSVANYF HQHGWQTGDP VAFRLESYGE
TPPTASLWQG EPLTLKASDI LADGFGLADK RDLDVARPAM LFKLEQETHN EYWMGFKNFF
VITRYNRSPL YAMAAYEFSE QLKHAHAKY
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