| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2587 |
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| Symbol | |
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| ID | 4604834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3094869 |
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| End bp | 3095339 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781988 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_928459 |
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| Protein GI | 119775719 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000227435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.158924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC AACTCATCGC CGTGGGCACC AAGATGCCCG ATTGGGTTAC CCGCGGATTT
GAAGAATACC AGCGCCGCTT CCCCCGTGAT ATGGCGCTGG AGCTGGTCGA AATTCCCGCT
GGCAAGCGCG GCAAAAATGC CGATATCGCC CGCATCCTGC AAAAGGAGGG TGAACAAATG
CTTGCAGCAA TTCCCAAGGG TAATCATATT GTTACCCTGG ATCTTCCCGG CAAGAACTGG
ACGACTCCCG AACTTGCGAG TGCCCTGTCC AAATGGCAGC TCGATGGCCG GGATGTCAGC
CTCCTGATTG GTGGCCCCGA AGGCCTCGCC CCGGCATGCA AACAGGCCGC GGCCCAGAGC
TGGTGTTTGT CGGCGCTGAC TCTGCCACAT CCCCTGGTGA GGGTGGTCGT GGCGGAAAGC
CTCTACCGGG CCTGGAGCAT TAACAACAAC CATCCTTATC ACAGGGAATA G
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| Protein sequence | MKLQLIAVGT KMPDWVTRGF EEYQRRFPRD MALELVEIPA GKRGKNADIA RILQKEGEQM
LAAIPKGNHI VTLDLPGKNW TTPELASALS KWQLDGRDVS LLIGGPEGLA PACKQAAAQS
WCLSALTLPH PLVRVVVAES LYRAWSINNN HPYHRE
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