Gene Sama_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2576 
Symbol 
ID4604823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3083549 
End bp3084619 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content54% 
IMG OID639781977 
ProductPhoH family protein 
Protein accessionYP_928448 
Protein GI119775708 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0746934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAGTA AACTTACCAC CATGAACCTC TATCTGGAGC CCGCAGACAG CCGCCGTTTG 
GCCTCCCTCT GTGGTCCCTT TGATGACAAC ATCAAACAGC TCGAGCGCCG TATCGGTGTT
GAAATCAGTT ACCGCAACAA CCATTTTCAG ATTGTGGGTC AGCCACGCAA CTGCCTGACT
GCCAATAACC TGCTCAAATC CTTGTATGTG GAAACCGCAC CGGTGAAGGG CAGTACGCCT
GATCTGGAGC CGGAGCAGGT GCATATCGCC ATTCAGGAAG CCATTGCCCT GGAAGCCGAA
GACGAGCATG AGGATCTGAA AGAGCATTAC ATCAAGACCC GCCGGGGTGT AATTAAGCCG
CGCAATCCCA ATCAGAGCCA ATATGTGGTC AACATAGTGC GCCACGACAT CACCTTTGGT
ATTGGCCCCG CGGGTACAGG TAAAACCTAC CTTGCAGTAG CTGCCGCAGT GGATGCGCTT
GAGCGCCAGG AAATCCGTCG AATCCTGCTG ACACGCCCTG CGGTGGAAGC GGGCGAGAAA
CTGGGCTTTT TGCCCGGCGA TTTGAGTCAG AAAGTCGACC CTTATCTGCG CCCACTGTAC
GATGCCCTGT TTGAAATGCT CGGCTTTGAA AAGGTTGAAC GCCTGATTGA GCGCAGCGTG
ATTGAAATTG CGCCACTGGC CTATATGCGT GGCCGCACCC TGAATGATGC TTTTATCATT
CTGGATGAGA GCCAAAACAC CACGGTGGAG CAGATGAAAA TGTTCCTCAC CCGTATCGGC
TTTAACTCCA AGGCCGTGAT CACCGGCGAC ATCACCCAGA TTGACCTGCC CAAGCATCAA
AAGTCAGGTC TGCGCCATGC CATCGAAGTG CTGGGCGATG TGAATGAAAT CAGCTTTAAC
TTCTTCCAGT CCAAAGACGT GGTGCGCCAC CCCGTGGTTG CCCGTATCGT TGAGGCATAC
GAAGAGTTCG AAGCCAAACA GCAGGCAAAC AAAGGCCGTC ACGACAGCCA ATACCGTCTG
GCAGACAGCC CTCAGGCAGA CACCGCCGAA GGAGAACCCC ATGGCGCTTG A
 
Protein sequence
MASKLTTMNL YLEPADSRRL ASLCGPFDDN IKQLERRIGV EISYRNNHFQ IVGQPRNCLT 
ANNLLKSLYV ETAPVKGSTP DLEPEQVHIA IQEAIALEAE DEHEDLKEHY IKTRRGVIKP
RNPNQSQYVV NIVRHDITFG IGPAGTGKTY LAVAAAVDAL ERQEIRRILL TRPAVEAGEK
LGFLPGDLSQ KVDPYLRPLY DALFEMLGFE KVERLIERSV IEIAPLAYMR GRTLNDAFII
LDESQNTTVE QMKMFLTRIG FNSKAVITGD ITQIDLPKHQ KSGLRHAIEV LGDVNEISFN
FFQSKDVVRH PVVARIVEAY EEFEAKQQAN KGRHDSQYRL ADSPQADTAE GEPHGA