| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2572 |
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| Symbol | |
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| ID | 4604819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3079326 |
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| End bp | 3079913 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781973 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_928444 |
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| Protein GI | 119775704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00102375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.060871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCGATA TTAAACTGAT TGTGGGTCTG GCCAACCCTG GGGCGGAATA CGCTCAAACC
CGCCATAATG CGGGTGCCTG GTATGTCGAA GAGCTGGCCC GCATTGCCAA TGTGAGTCTG
GCGCCTGACC CCAAGTATTT CGGTTTAACG GCAAGGGCAA TTCTGTGTGG TAAGGATGTG
CGTTTGCTTA TCCCCTCAAC CTTTATGAAC TTAAGTGGCA AGTCGGTGGC GGCGTTGGCG
AATTTTTTCC GCATTGAACC GGAACAGATT CTGGTGGCCC ATGACGAGCT GGATATGGAG
CCCGGTGTGG CCAGGTTCAA GTTGGGTGGT GGGCACGGCG GCCACAATGG TCTTAAAGAC
ATCATTGCCA AAATGGGCAA CAACAAAAAT TTCTATCGTT TGCGGATAGG CATTGGTCAT
CCGGGCGACA AAAACAAGGT CAGCGGGTAT GTGCTGGGTA AGGCGCCCGC GACCGAGCAG
GAAAAGATGA ATGCGGCGAT AGATGAAGCC GTGCGCAGCA CCGAAATCCT GTTCAAGCAA
GACATGACCA AGGCAATGCA CAGATTGCAT TCCTTCAAGG CCGAATAA
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| Protein sequence | MCDIKLIVGL ANPGAEYAQT RHNAGAWYVE ELARIANVSL APDPKYFGLT ARAILCGKDV
RLLIPSTFMN LSGKSVAALA NFFRIEPEQI LVAHDELDME PGVARFKLGG GHGGHNGLKD
IIAKMGNNKN FYRLRIGIGH PGDKNKVSGY VLGKAPATEQ EKMNAAIDEA VRSTEILFKQ
DMTKAMHRLH SFKAE
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