| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2570 |
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| Symbol | |
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| ID | 4604817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3076087 |
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| End bp | 3077034 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781965 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_928442 |
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| Protein GI | 119775702 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00338227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.11667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGACA TCAAGCTCTT TGCTGGGAAT GCTACCCCCA GTCTCGCGAA AAAGATTGCC
GACCGTTTAT TTTGCAAACT TGGAGAGGCT GAGGTAGGCC GTTTCAGTGA CGGTGAAATC
AGTGTCCAGA TCAACGAAAA TGTACGTGGT GCTGATGTTT TCATCATTCA ATCCACCTGC
GCCCCCACCA ATGACAACCT GATGGAACTC ATTGTGATGG TCGATGCTCT GCGCCGCGCC
TCTGCAGGTC GTATCACTGC CGTAATCCCA TACTTCGGTT ATGCCCGTCA GGATCGCCGT
GTGCGCTCTG CCCGTGTGCC TATTACCGCC AAAGTGGTTG CCGACTTCCT GTCAAGCGTT
GGTGTTGACC GCGTACTGAC CTGTGACCTG CACGCCGAGC AGATCCAGGG CTTCTTCGAC
GTGCCGGTAG ACAACGTGTT CGGTAGCCCA GTGCTGCTGG AAGACATGGT TGCCAAGAAG
CTGGACAACC CTGTGGTTGT GTCTCCGGAC ATCGGTGGCG TTGTCCGCGC CCGCGCCGTT
GCCAAGCTGC TGAACGATTC CGATCTGGCC ATTATCGACA AGCGTCGCCC ACAGGCCAAC
GTGGCTCAGG TCATGCACAT TATCGGTGAC GTTGAAGGTC GTGACTGCAT CATCGTTGAC
GACATGATTG ATACCGGTGG CACCCTGTGT AAAGCCGCCG AAGCCCTGAA AGAACATGGT
GCCAACCGCG TATTCGCTTA CGCCACTCAC CCAGTGTTCT CCGGCAAGGC CGCTGAAAAC
ATCAAAAACT CTGTGATTGA TGAAGTGATA GTGACCGACA CTGTGCCTCT GAGCGAAGAG
ATGATGAAAG TAGGTAAAGT CAGTCAGCTG ACCATGTCTG CCCTGCTCGC CGAAGCCATT
CGCCGTGTGA GCAACGAAGA ATCCATCTCT GCCATGTTCC AGCACTGA
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| Protein sequence | MPDIKLFAGN ATPSLAKKIA DRLFCKLGEA EVGRFSDGEI SVQINENVRG ADVFIIQSTC
APTNDNLMEL IVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTCDL HAEQIQGFFD VPVDNVFGSP VLLEDMVAKK LDNPVVVSPD IGGVVRARAV
AKLLNDSDLA IIDKRRPQAN VAQVMHIIGD VEGRDCIIVD DMIDTGGTLC KAAEALKEHG
ANRVFAYATH PVFSGKAAEN IKNSVIDEVI VTDTVPLSEE MMKVGKVSQL TMSALLAEAI
RRVSNEESIS AMFQH
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