| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2568 |
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| Symbol | |
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| ID | 4604815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3074536 |
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| End bp | 3075159 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781963 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_928440 |
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| Protein GI | 119775700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00716093 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.193169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAACT TGCGCCGATT CACAAAATTC ACTCTTGCTG GCCTGACCGC CCTTTCTCTG
CTCGGTGGTT GCAGCGTCAC ACCAAAGGTC GCGCTGCAGC CTGTCAGCGT AGAAAACGCC
AGTGATGCCA AGGCCTGGGA GCTTAAGGGC AAGCTGCTTA TTCGCACCAA TGGCGACAAG
GTTTCGGCCA ACCTCTTCTG GCTCAATACC CCTGATAATG CCGAATTAAG GCTGACCAGC
ATGCTGGGCA CTACTGTGCT GCTGCTGACC CAAAACCGGG ATGGCGCCAC CCTGGAAGTG
GATGGCAAGC GCTACTCAGA CCTGAGTCCA CAGCGGTTGC TCGACGGTTT AAGTGGTTTT
ACCCTGCCCA TCGATGCCCT GCCCTTTTGG ATCACCGGCC AGCCCATGGC GGGTGATGAG
GTGGAGTTCG ACACCCTCAA TCGCCCCAAG ACCATCATCA GTGCCGACGG CGAGTGGACC
ATTAACATTA GCAGCTGGCA GACCCAGAGT GGTGCACCGG TTCCACGGAT GCTGGAGCTT
ACCCACGCCA GCGCTGTTAT CAAGCTGCAA ACCAATGAAT GGCAGGCACT GGCCAATGCC
ACAGGTTCGA AAGGAGCCCG ATGA
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| Protein sequence | MINLRRFTKF TLAGLTALSL LGGCSVTPKV ALQPVSVENA SDAKAWELKG KLLIRTNGDK
VSANLFWLNT PDNAELRLTS MLGTTVLLLT QNRDGATLEV DGKRYSDLSP QRLLDGLSGF
TLPIDALPFW ITGQPMAGDE VEFDTLNRPK TIISADGEWT INISSWQTQS GAPVPRMLEL
THASAVIKLQ TNEWQALANA TGSKGAR
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