Gene Sama_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2564 
Symbol 
ID4604811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3070567 
End bp3070965 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content49% 
IMG OID639781959 
Producthypothetical protein 
Protein accessionYP_928436 
Protein GI119775696 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.44085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCA TCAACAACCT CTATCCCGTC TTTAAGCACC TGCACCTGAC GCTGGTGGCA 
ACCAGTGTGC TCTTCTTTGT GGTGCGCTTC GTGCTCAAAT TAAAAGAATC TGCCCTGCTG
CAGAAAAAGG TGATGCGCAT TGCACCCCAC ATCATAGATA CCTGTCTGTT GCTGTCGGGT
CTGCTGATGT GTTTCCTTAT CAAACAATAT CCCTTCGTTG ACCCCTGGTT GACCGAGAAA
ATCCTTGCTG TGGTTGCCTA CATTTTGCTG GCCATCATGG CGATGAAGTC CAATCGCAAT
AAATTTTTCC GCTTTTTTGC GTTCCTCGGC GCCATCGCCT GGGTTGTGTA TGCGGCCAAA
ATCGCTGTCT TTAAACAGGC CATAATGCTG GCATCATGA
 
Protein sequence
MESINNLYPV FKHLHLTLVA TSVLFFVVRF VLKLKESALL QKKVMRIAPH IIDTCLLLSG 
LLMCFLIKQY PFVDPWLTEK ILAVVAYILL AIMAMKSNRN KFFRFFAFLG AIAWVVYAAK
IAVFKQAIML AS