| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2561 |
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| Symbol | |
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| ID | 4604808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3067601 |
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| End bp | 3068449 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781956 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_928433 |
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| Protein GI | 119775693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.18773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA AGACAATCCA ACTTGGCGAC ATCGCCATTG CCAATGACAA GCCCTTTGTA
CTCTTTGGCG GCATGAACGT GCTTGAATCG CGGGATCTGG CCATGAGTAT TGCCGAGAAA
TACCTGGAAG TGACCCAAAA GCTTGGGATC CCCTATGTAT TCAAGGCCTC TTTCGACAAG
GCCAACCGCT CGTCTATCAA CTCTTACCGT GGTCCCGGGA TGGAAGAAGG CCTGAAGATA
TTTCAGGAAA TCAAAGACAC CTTCAATGTG CCGCTGATCA CCGATGTGCA CGAGCCTCAT
CAGTGTGCCC CCGTGGCAGA AGTGGTCGAC ATCATTCAGC TGCCAGCCTT TTTGGCACGC
CAGACCGATC TGGTGATTGC CATGGCCAGA ACCGGCGCCA TCATCAACGT GAAAAAGCCA
CAGTTTCTGG CTCCCCACGA GATGCGCCAC ATAGTGAAGA AATTCAACGA GGCCGGTAAC
GACGAGATTA TCCTGTGCGA GCGCGGCAGC TGCTTTGGTT ACAACAACCT GGTGGTGGAC
ATGCTGGGCA TGGATGAGAT GAAACAGAGC GGTTATCCGG TAATTTTCGA TGCCACCCAT
GCACTGCAGC GTCCGGGCGG CCGTGAAGAT TCTGCCGGTG GTCGCCGCGC CCAGGCAACT
GAGCTTGCCC GCAGTGGTAT GGCGCTGGGT CTGGCAGGTC TCTTTATCGA AGCACATCCG
GATCCCGACA ATGCCAAGTG CGACGGCCCC TGTGCTCTGC CACTGCATCA GCTGGAAGCT
TACCTCAGTC AGATGAAAGC GGTAGATGAC CTGGTGAAAT CTTTTCCTGC ACTGGATACC
AGCAAGTAA
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| Protein sequence | MSIKTIQLGD IAIANDKPFV LFGGMNVLES RDLAMSIAEK YLEVTQKLGI PYVFKASFDK
ANRSSINSYR GPGMEEGLKI FQEIKDTFNV PLITDVHEPH QCAPVAEVVD IIQLPAFLAR
QTDLVIAMAR TGAIINVKKP QFLAPHEMRH IVKKFNEAGN DEIILCERGS CFGYNNLVVD
MLGMDEMKQS GYPVIFDATH ALQRPGGRED SAGGRRAQAT ELARSGMALG LAGLFIEAHP
DPDNAKCDGP CALPLHQLEA YLSQMKAVDD LVKSFPALDT SK
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