Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2556 |
Symbol | |
ID | 4604803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3063265 |
End bp | 3064665 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781951 |
Product | AmpG protein, putative |
Protein accession | YP_928428 |
Protein GI | 119775688 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.368438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTTAC CTACCGCTGC CTTAATCAGA CTCTGGGAAC TCCTGGCGGT ATACCGCCAT CGCCGGGTAC TGGTGATGCT GTTCCTCGGC TTCTCTGCCG GTTTACCCCT GATGCTGGTG TTCTCGACCC TGTCATTCTG GCTGCGTGAA GCCGGTGTCG ATCGCACTGC CATTGGTTAT TTCAGCTGGA TTGCCATCCT CTATGCGTTC AAATGGCTCT GGTCCCCGCT GGTGGATCGC ATGCCACTGC CGGTGTTCTC AAAGCTGTTT GGTCGGCGCC GGGGCTGGAT GCTGTTTGCC CAGTTAATGC TGATTGGGGC CATTGTGGGC ATGGCCAGCA GCGACCCAAA AGAAAGCCTC ACCTATATGG CCATATGCGC CCTGATGGTG GCCTTTGCCT CAGCCACCCA GGATATAGTA ATAGATGCCT TTCGCATCGA ATCAGCCCCC CAGGAAATGC AGGCGGCCCT GGCGGCTGCT TATCAAATTG GCTATCGCTC GGCCATGATT ATCGCGACCG CCGGCGCCCT GACCATCGCC GCCTGGGTCG CGCCGGAAGC CGATGGCTAT CGGCTCGCGT CATGGCAAAC TGCTTATATG GTCATGGCAG GATTGATGCT CATTGGGGTG ATAACCACCC TGTGCGCCAA AGAGCCTGCC GTCGACCAGG GGAAGGCAAA TGCGCTGGAA GCCGAGATGC GCGAGCGCCT CAGTAAAAAA TACTCGCCCC GCACGGCCGC GGCCCTGTCC TGGACCTATA ACGCAGTCGC CGCGCCCTTT ATCGATTTTT TCAGGCGTTA CGGCAAGAGC GCCATCCTGA TCCTGGCGCT GATTTCCTGC TACCGGATTT CAGACATAGT CATGGGGATT ATGGCGAATG TGTTCTACGT GGACATGGGA TTTTCCAAAG AGGAAATCGC CTTTCTGAGC AAGGTGTATG GCCTTATCAT GACCCTGGTT GGCGCAGCCT TCGGGGGCAT ACTGCTGGCG AAATATGGCA CCATGCGCAT TCTGTTTTTA GGCGCTCTGC TGGTTGCCAC CACCAACCTG CTGTTTGCCT GGCAAGCCAT GGTTGGATAC AACATGGAAC TGCTGACACT GGCGATATCC ATAGATAACT TCAGTGGTGG TATCGCCACA GCAGCCTTTA TCGCCTATTT GTCGAGCCTC ACAAGCAGTG GCTACAGCGC GACCCAGTAT GCGCTGCTGT CGTCCATCAT GTTGCTGTTT CCCAAGTTTA TTGCCGGTTT CTCCGGTGCC TGGGTCGATG CCTTTGGCTA TGTGAACTTT TTCATTACCG CCAGCCTGAT TGGTCTACCG GTATTGCTGC TGGTATGGCT GGTAGGAAAG CTGTCGCCCC CTGCCCACGC CGAGGCAAGG AGCGAGCAGG TGACAGACTG A
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Protein sequence | MYLPTAALIR LWELLAVYRH RRVLVMLFLG FSAGLPLMLV FSTLSFWLRE AGVDRTAIGY FSWIAILYAF KWLWSPLVDR MPLPVFSKLF GRRRGWMLFA QLMLIGAIVG MASSDPKESL TYMAICALMV AFASATQDIV IDAFRIESAP QEMQAALAAA YQIGYRSAMI IATAGALTIA AWVAPEADGY RLASWQTAYM VMAGLMLIGV ITTLCAKEPA VDQGKANALE AEMRERLSKK YSPRTAAALS WTYNAVAAPF IDFFRRYGKS AILILALISC YRISDIVMGI MANVFYVDMG FSKEEIAFLS KVYGLIMTLV GAAFGGILLA KYGTMRILFL GALLVATTNL LFAWQAMVGY NMELLTLAIS IDNFSGGIAT AAFIAYLSSL TSSGYSATQY ALLSSIMLLF PKFIAGFSGA WVDAFGYVNF FITASLIGLP VLLLVWLVGK LSPPAHAEAR SEQVTD
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