| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2550 |
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| Symbol | |
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| ID | 4604797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3058695 |
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| End bp | 3059558 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781945 |
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| Product | sterol desaturase family protein |
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| Protein accession | YP_928422 |
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| Protein GI | 119775682 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.534316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG ACAAGCTAAT TGCCCATCCG GAGCTGCTGC TGATAGTGTT GGCGCCGATT
TTTTTTCTGT GCATGGCGCT GGAGTTTGTG GTCGCCAATG TGCGTAAGCG ACTGCCGGAA
AATGCCAGAT ACAGTAAAGC AGAGCTCCTG TGTAACCTCA GTCTGGCGGG AATGCACCAG
GCTGCCGATC TGCTGAGCGG ATTTCTGATT GCCAAACTGT ACCTGTATTT TTTTGGTTGG
CGGCTGTTCG ATATTGAAAT GAATGGGCTT AATTTTGTGT TGCTGCTGCT GGCACAGGAT
TTTTGCTATT ACTGGTTCCA TCGTTGCAGC CACCGATGCC GCTGGATGTG GGCCGCTCAT
GTGGCTCATC ACAGCTCAGA AAACATGAAC TTTTCCACCG CTTTCAGACA AAGCCTGATG
TACCCGCTGG CGGGAATGTG GATATTCTGG TTGCCTCTGG TTGTGATTGG TTTCGACCCT
GCCTGGGTCG TGTTTGCGGT GCTGGCAAGC CTTGGGTTTC AGTTTTTTGT ACATACCCAG
CTGGTGGATA AACTTGGCCC GCTGGAATGG GTATTCAATA CTCCCAGCCA CCACAGGGTG
CATCACGGCT CAAATCCCCA ATACATAGAT AAAAACTACG CCGGCGTGCT CATCATTTGG
GATCGGCTGT TTGGCACCTT CGTCAAAGAA GAGGAAACCG TGCGCTACGG CATCACCAAG
CCGATTAACA GCATGAACCC GCTCACGGTC ACCTTCAGTG AATGGCGCGA TATGTTCACA
GATGCCACGG CGCCGGGGCT GAGTCTCGCC GAGCGCTGGC GTCAGCTTTT TGCACCACCC
TCCAGCGCCA ACGATAAGGA TTGA
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| Protein sequence | MNLDKLIAHP ELLLIVLAPI FFLCMALEFV VANVRKRLPE NARYSKAELL CNLSLAGMHQ
AADLLSGFLI AKLYLYFFGW RLFDIEMNGL NFVLLLLAQD FCYYWFHRCS HRCRWMWAAH
VAHHSSENMN FSTAFRQSLM YPLAGMWIFW LPLVVIGFDP AWVVFAVLAS LGFQFFVHTQ
LVDKLGPLEW VFNTPSHHRV HHGSNPQYID KNYAGVLIIW DRLFGTFVKE EETVRYGITK
PINSMNPLTV TFSEWRDMFT DATAPGLSLA ERWRQLFAPP SSANDKD
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