| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2540 |
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| Symbol | |
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| ID | 4604787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3049367 |
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| End bp | 3051172 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781935 |
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| Product | hypothetical protein |
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| Protein accession | YP_928412 |
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| Protein GI | 119775672 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.600129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.687458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA CCCCTGCGCT TGTAGGCAGC CTATTGATGG GCGTTACAAG TATTTCAGGT
TGGGCGAGTG AAGTTACAAC GTCCGATACC AGCCCTTTCT TTATTGAGCG ACTCGGGTTG
AATACCCCGT CAGCACTGCC ACTCTACCCC ACTGGCCTGA TGGTCGGTCG GGGCGATCTG
TTTGGTGAAA GTCGCTTTCT CCATGCCGAC AGCCACGCCG CAATCCCAGA ATTGATGGGG
ACATCTCTTG CAGCAGCCCC CTATGTTGCT CCGGGAGTGT GGCTCAATAC CGGCCGTTTT
GGTATTGAGG CCATGGACAA TTGTGCCTCG CAGACTGAGT GGGTTCAGAT TAACTGCGTT
AACCAAAACG GCGGTGATTA TTTGGTTCCG GCGATAGGCA CCAGTGGTAA TTCGATAGGA
CTTGAAGCGC GGGATGATAA AACCGGTGGC CTGAGGGCGG CGTTTGCCTC CCGCAACGAT
GCCCTCGATA TGAGCTTTGC CGGCAGTCAC CTGAGACGTG AGGAAGGCGA CGACTGGTGG
GTTCAGACCA AAGATACAGA AGTCTTTGTT GCCCTGGGGG CTTCAAGTTT ACCCGGGGCC
AGAAAAAAAC AACGCACCGA GCTCTCCTGG CTCTATAAAG ATGCAACATC AGCCCTGCCT
GCAAGCGACT GGATACAGCA GAGTGACAGA CAGCGTTTGC AGCTCAGTCA CAGCGTTCAA
ACCGGCGAAA GCCGTCGCAC CGACACCCGG CTATTTTATC AGGAAACCGG GTTTCGGACC
TTTCTGGCCG ATATGACGAT GATGCCAACG CCGCCGATTC TCCCGGTCGC TGAGCATAGC
GGCAAACTGG GTGACAGCCA GTTCCATACC TATGGCATTG TCAGTGAGAG CCTGGACAAA
TTTGGCTCCC ACTCAATAGG CTACCGCCTC GCTTATCAAA GGGAAGGCGC AGAGTATTTA
CTTGCAGACA AACACATCAA TGACAGCGCC AGCGTGCTGG ATCTCGGCGT TCGTGGCCGC
CTGGGCTTTG ATTGGGTCGA TGTTGAAGTG GATGGACTCT GGCGCCGCGC CGATTTGACA
AGGGATACCA GCGAAGCGGG TACTGACTTC AGGGTTGACG ACTGGCAGTA CGGTGTGGGC
CTTTGGTTTG CCAATGATCG TATTATGCTC AGGGGTGAAC ATCGCTTTGC ACCGCCATCA
CCGGGAAATC TCGAGGCCTT ATCCCAAAGC GCTGACCACC TTCGTTTAAC GGCGCGTTGG
CCTTTGGGCG ACTTGATGCT GCAGGGGGAG GTTTGGTATC AGGCATTTGA TAACTTACAT
TTTGATTGTA CGGAGCTTTC TGACTGTGAA ACGATTCGCG GTGTATCTCA GCTCAATGCC
GGAGAGGTGG ATGCTGAGGG TCTGAGCCTG GGGCTGCAGT GGTCAGGGCA ATTCGGCATG
GTAAAGGTGC CCCTGTCTAT CCAACTGGAA GAGAATCGTG CCAACTTTGC GTCAAGTGCC
TGCCTTGAAC AGTACTCTGT GTGTTGGCAG GATGGCGACC GGGTTCCCTG GCAACCACAG
CGGCAAGTGA CGCTGGCAAT GGGGCTGGCA GCAGGTGAGT GGTCACTCTC AGTGACGGGC
CGTGACAGTG AATTTGTTGA TGAAAACCTG CGCCGAATCG ATGTCAGTCT CAGTTGGCAA
CGAGGAGCGC ATCAGGTGTA TCTCAGAGGG GATAATGTGT CCGCCGAGCC GCTGTCAAAC
CCCACCGACT TTGGTCCAAT ATCCGGTGAA GTTTTAGTCA GTCTAGGATA TCGCTGGCAC
GGTTGA
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| Protein sequence | MKQTPALVGS LLMGVTSISG WASEVTTSDT SPFFIERLGL NTPSALPLYP TGLMVGRGDL
FGESRFLHAD SHAAIPELMG TSLAAAPYVA PGVWLNTGRF GIEAMDNCAS QTEWVQINCV
NQNGGDYLVP AIGTSGNSIG LEARDDKTGG LRAAFASRND ALDMSFAGSH LRREEGDDWW
VQTKDTEVFV ALGASSLPGA RKKQRTELSW LYKDATSALP ASDWIQQSDR QRLQLSHSVQ
TGESRRTDTR LFYQETGFRT FLADMTMMPT PPILPVAEHS GKLGDSQFHT YGIVSESLDK
FGSHSIGYRL AYQREGAEYL LADKHINDSA SVLDLGVRGR LGFDWVDVEV DGLWRRADLT
RDTSEAGTDF RVDDWQYGVG LWFANDRIML RGEHRFAPPS PGNLEALSQS ADHLRLTARW
PLGDLMLQGE VWYQAFDNLH FDCTELSDCE TIRGVSQLNA GEVDAEGLSL GLQWSGQFGM
VKVPLSIQLE ENRANFASSA CLEQYSVCWQ DGDRVPWQPQ RQVTLAMGLA AGEWSLSVTG
RDSEFVDENL RRIDVSLSWQ RGAHQVYLRG DNVSAEPLSN PTDFGPISGE VLVSLGYRWH
G
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