Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2537 |
Symbol | |
ID | 4604784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3045658 |
End bp | 3046455 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781932 |
Product | Na(+)-translocating NADH-quinone reductase subunit C |
Protein accession | YP_928409 |
Protein GI | 119775669 |
COG category | [C] Energy production and conversion |
COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0946412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.964956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAGA ATAAAGATTC GTTCGGAAGA ACGCTGTTTA TCGTTGTTGG CCTGTGTCTG GTGTGCTCGA TTTTCGTATC GACTGCAGCC GTGTTACTGC GCCCAACCCA GCAGGAAAAC AAGCTGCTGG ATAAGCAAAA GTACATTCTG GAAGCCGCCA ATCTGGTGGA TACCAAGGCC GCTAACGTGA CCAAGGCTGA CATCCTGGCG ACTTACAACA AGTATGTTGA AGCCCGTGTG GTGAACCTGA AGACCGGTGA GTTTGTGGAA GGCGTTGATG GCAATACCTT TGACCAGGAA AAAGCTGCCC GCGATCCAAA GACCTCTTCC AAGCCAGAAC ACGATATTGC CTCTATTAAG CGTGTGCCTG ATCAGGCTGT AGTGTATCTG GTGCGTGATG ATGCCGGTGC GCTCAAGACT GTGATCCTGC CTGTGAAAGG TTATGGCCTG TGGTCTACCA TGTTTGCCTT CCTGGCTCTG GAGCCGGATC TGAACACCAT TCAGGGTCTG GTTTACTACG ACTTCACAGG TTCAGGTGAA ACTCCTGGTC TGGGTGGCGA AGTACAAAAT CCAAAGTGGA AAGCGCTGTG GCACGGCAAA AAGCTGTTCG ACGAGCAGGG TAAACTGGCA ATCAGCGTAA CCAAAAACCC AGCAGTAGCT GCATCTGTAC ACGGCGTTGA TGCCCTGTCC GGTGCGACTC TGACCAGTAA CGGTGTTCAG CACTCGCTGA CGTTCTGGCT GGGTAAAGAA GGCTTTGCGA GTTTCATTGA AAAAGCACGC AACGGAGGGC TGAGCTAA
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Protein sequence | MAKNKDSFGR TLFIVVGLCL VCSIFVSTAA VLLRPTQQEN KLLDKQKYIL EAANLVDTKA ANVTKADILA TYNKYVEARV VNLKTGEFVE GVDGNTFDQE KAARDPKTSS KPEHDIASIK RVPDQAVVYL VRDDAGALKT VILPVKGYGL WSTMFAFLAL EPDLNTIQGL VYYDFTGSGE TPGLGGEVQN PKWKALWHGK KLFDEQGKLA ISVTKNPAVA ASVHGVDALS GATLTSNGVQ HSLTFWLGKE GFASFIEKAR NGGLS
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