| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2536 |
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| Symbol | |
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| ID | 4604783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3045032 |
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| End bp | 3045658 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781931 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_928408 |
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| Protein GI | 119775668 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0656871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.956301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG AACTGAAAAA GGTTCTGACC GGACCTATTA TCAATAACAA CCCGATTGCG
CTGCAGATCC TCGGTGTTTG TAGTGCGCTG GCAGTAACCA GCAAGCTGGA AACTGCACTG
GTGATGACCC TGGCGCTGAC CGCAGTGACT GCGTTCTCGA ACCTGTTCAT CTCCATGATC
CGTAACCACA TTCCAAGCAG TGTGCGTATT ATCGTGCAAA TGGCGATTAT CGCCTCGCTG
GTAATCGTGG TTGATCAAAT CCTGCAAGCT TACGCCTATG ACGTGGCCAA GCAGCTGTCA
GTATTCGTGG GCCTTATCAT CACTAACTGT ATCGTGATGG GCCGCGCCGA AGCCTACGCT
ATGAAGACTC CTCCAATGAT GAGCTTTATG GATGGTATCG GTAACGGTCT GGGCTATGGC
GCCATCCTGC TGTCTGTTGG CTTCGTTCGT GAACTGTTTG GTAACGGTTC GCTGTTCGGC
GTAGAGATCC TGTCCAAGAT CTCTGACGGT GGCTGGTATC AGCCCAACGG TCTGCTCCTG
CTGCCGCCAA GTGCGTTCTT CCTGATCGGT GTTCTGATTT GGATCATCCG CACCTACAAG
CCTGAGCAAG TTGAAGCAAA AGGATAA
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| Protein sequence | MANELKKVLT GPIINNNPIA LQILGVCSAL AVTSKLETAL VMTLALTAVT AFSNLFISMI
RNHIPSSVRI IVQMAIIASL VIVVDQILQA YAYDVAKQLS VFVGLIITNC IVMGRAEAYA
MKTPPMMSFM DGIGNGLGYG AILLSVGFVR ELFGNGSLFG VEILSKISDG GWYQPNGLLL
LPPSAFFLIG VLIWIIRTYK PEQVEAKG
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