| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2533 |
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| Symbol | |
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| ID | 4604780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3042011 |
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| End bp | 3043036 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781928 |
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| Product | thiamin biosynthesis lipoprotein ApbE |
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| Protein accession | YP_928405 |
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| Protein GI | 119775665 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.903036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CCTTATCTAA CTGGCTGGTC CTCGTCGGAC TGGCCTTTTT TATTTCAGCT
TGTTCTAAAG CACCTGAGGT TGTCAGCCTG TCTGGCAGCA CCATGGGCAC CACGTATCAC
ATCAAGGTGG TTCCCAGTGA CGCCTTACCC CAAAGCCAGC TGCTGCAGGC AGAAATTGAC
CTGGCGTTGG AGCGCGTGAA TGACCAGATG TCTACTTACC GTCCCACCTC TGAGCTGAGC
CGCTTCAATC AGTTGCCATT GGAGCAGGGT GTTGAGGTGT CGGATGACAC TATCAAGGTG
GTCCGAGAGG GAATTCGCTT AAATGAGCTA ACCGACGGCG CGCTGGATAT TACTCTGGGC
CCACTGGTCA ATATCTGGGG GTTTGGACCG GACAAGCGAC CAACTAAATC CCCCACCGAA
GCTGAAATCG CCGACGCCAA GACTCGCACC GGTATTCAGA ACATCAGCAT TGAAGGTAAC
CGCCTCTTTA AGCGCAACGC TCACCTTTAT GTGGATTTGT CATCCATTGC CAAGGGCTAT
GGCGTGGATG TGATTGCCGA TTTACTGGAT AAGTATCACA CCAGCGGTTA TCTGGTAGAA
ATTGGCGGTG AACTGCGTAT CAAGGGCACC AAGGGTGATG GTAGCAGCTG GCGTGTAGCC
GTTGAAAAGC CACAGGCTGA AGGCCGTGCG GTGTCTCAGG TAATAGAACC CGGTGATATG
GGTATGGCTA CCTCTGGCGA TTATCGCAAT TACTTCGAAG AAAATGGCAA ACGCTTCTCA
CATCTGATAG ACCCAAGGAC CGGTTATCCC ATCGAGCACA CCCTCGCATC TGTGACAGTG
CTGCATCCAA GCTGTATGAC TGCCGACGGC CTGGCGACGG CCATGATGGT GCTCGGCACG
GAAGCGTCAT TGATTCTTGC CAAACAGCAG GGACTGGCGA TAATGCTGAT TGAAAAACAG
GGCGAAGAGT TTGTGGTACA CTACAGCGAC GCATTTTTGC CCTTCGTTAA GTCCACTCAG
GAGTGA
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| Protein sequence | MKKTLSNWLV LVGLAFFISA CSKAPEVVSL SGSTMGTTYH IKVVPSDALP QSQLLQAEID
LALERVNDQM STYRPTSELS RFNQLPLEQG VEVSDDTIKV VREGIRLNEL TDGALDITLG
PLVNIWGFGP DKRPTKSPTE AEIADAKTRT GIQNISIEGN RLFKRNAHLY VDLSSIAKGY
GVDVIADLLD KYHTSGYLVE IGGELRIKGT KGDGSSWRVA VEKPQAEGRA VSQVIEPGDM
GMATSGDYRN YFEENGKRFS HLIDPRTGYP IEHTLASVTV LHPSCMTADG LATAMMVLGT
EASLILAKQQ GLAIMLIEKQ GEEFVVHYSD AFLPFVKSTQ E
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