Gene Sama_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2530 
Symbol 
ID4604777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3040067 
End bp3040537 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content49% 
IMG OID639781925 
Productbacterioferritin subunit 2 
Protein accessionYP_928402 
Protein GI119775662 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID[TIGR00754] bacterioferritin 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.489061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.794719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCC ATGCCAGTGT GGTAAGCCAC CTCAACAAGG TATTGACTGC CGAGCTTACT 
GCAATCAATC AATATTTCCT TCATGCCCGG ATGTTCAAAA ACTGGGGGCT GGAAAAGCTC
AACAGCAAGG ATTACAAAAA ATCCATCGAA GACATGAAGC ATGCCGACAA ACTGATTGAG
CGGGTGCTGT TTCTTGAGGG CTTGCCTAAC CTCCAGGCAT TGGGAAAGCT GCGTATCGGT
GAACATTCAG AAGAAATGCT TGGCTGTGAC AAGAGCATGC TGGAGGAGCA GTTGCCACTG
CTGCGTGCCG CCATCGCCGA ATGTGAAAAA CTGCAGGACT ATGTAAGCCG CGATATCCTC
GAAGACATTC TTGAAGACGA GGAAGAGCAT CTCGACTGGC TCGAGTCCCA GTTTGAGCTT
ATCCGCCTCA CCGGCATTCA AAACTACTTG CAGTCGCAAA TGGACGATTG A
 
Protein sequence
MKGHASVVSH LNKVLTAELT AINQYFLHAR MFKNWGLEKL NSKDYKKSIE DMKHADKLIE 
RVLFLEGLPN LQALGKLRIG EHSEEMLGCD KSMLEEQLPL LRAAIAECEK LQDYVSRDIL
EDILEDEEEH LDWLESQFEL IRLTGIQNYL QSQMDD