| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2529 |
|---|
| Symbol | |
|---|
| ID | 4604776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3039585 |
|---|
| End bp | 3040055 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639781924 |
|---|
| Product | bacterioferritin subunit 1 |
|---|
| Protein accession | YP_928401 |
|---|
| Protein GI | 119775661 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2193] Bacterioferritin (cytochrome b1) |
|---|
| TIGRFAM ID | [TIGR00754] bacterioferritin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTC ATCAGGAAGT CATAGATGCG CTGAATGGTT TGCTTACCGG TGAATTATCG
GCAATGGATC AGTATTTTGT GCATGCCAGA ATGTATGAGG ATTGGGGACT GAATGAGCTT
TACGAGCGCA TCGCCCATGA ATCAGATGAC GAGCGCGAGC ATGCGGCAAA ATTGGTGTCA
CGTATTCTGT TTCTGGAAGG TACACCGGAT GTCGCCAGCC GGGAAAAGCT CAACATAGGT
AAAGATGTGG AAGCCATGTT GAAGAGCGAT CTGGCATATG AATACAAGGT GGCCGATAAC
CTGCGCCGGG TTATTGCCCT GTGTGAAGCC AAGGGAGATT ATGTCACCCG TGAGCTGTTG
CAGCAGCTGT TGGAAGAAAC CGAAGACGAC CACCTGTACT GGCTGGAAAA GCAACTGGGC
CTGATAGACC GCATCGGTTT GCCGAATTAT CTGCAGTCCA AAATGTCCTG A
|
|---|
| Protein sequence | MKGHQEVIDA LNGLLTGELS AMDQYFVHAR MYEDWGLNEL YERIAHESDD EREHAAKLVS
RILFLEGTPD VASREKLNIG KDVEAMLKSD LAYEYKVADN LRRVIALCEA KGDYVTRELL
QQLLEETEDD HLYWLEKQLG LIDRIGLPNY LQSKMS
|
|---|
| |