| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2522 |
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| Symbol | |
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| ID | 4604769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3030832 |
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| End bp | 3032535 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639781917 |
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| Product | amidase |
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| Protein accession | YP_928394 |
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| Protein GI | 119775654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.458083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAG TAACCGAAGT ATCCATTGCC GAGCTGCGCG GCGCGCTCGA ATCCGGCCGC
ACCACGGCGG TCGAACTGGT TAAAGCGTAT CTTGCCCGTA TCGAAGCCTA TGATGGCGCC
GATACCGACA CCAAACTCAA TGCGGTGGTG GTACACAACC CCGATGCACT GAAAGAAGCC
GAGGCCTCCG ATGCGCGCCG CGCCCGCGGC GAAACGTTGG GGCCACTCGA TGGCATCCCC
TACACCGCCA AAGACAGCTA TCTGGTGAAG GGCCTGACCG CCGCTTCCGG CAGCCCGGCC
TTTAAAGACT TGGTTGCCCA GCGTGATGCC TTCACCGTGG AGCGCCTGCG CGCCAATGGC
GCAATCTGCC TTGGCAAAAC CAATATGCCG CCCATGGCCA ATGGCGGCAT GCAGCGTGGT
GTGTATGGCC GCGCCGAAAG CCCCTATAAC GCAGCTTATC TCACTGCGCC CTTCGCCTCC
GGCTCATCCA ATGGCGCCGG TACTGCCACC GCCGCCAGCT TTTGCGCCTT TGGTCTGGCC
GAAGAAACCT GGTCCAGCGG CCGTGGCCCG GCGTCCAACA ATGGTTTGTG TGCTTACACC
CCGTCCCGCG GCGTGATTTC GGTACGCGGC AACTGGCCTC TGACCCCCAC CATGGACGTG
GTAGTGCCCT ACGCCCGCAC CATGGCTGAC CTGTTGGAAG TCTTGGACGT AGTAGTCGCC
GACGATAGTG AAACCCGCGG CGACCTGTGG CGTATGCAGC CCTGGGTTCA AATCCCCAAG
GCTTCCGAAG TGCGCCCCGA GTCGTATATC GCCCTCGCCT GTGGCGCAGA TAGCCTTAAA
GGCAAACGCT TTGGTGTGCC CAAGATGTTT ATCAATAAAG ATGAACTCGC CGGCACCAGT
GAAAACCCAG GTATTGGCGG CCCGACCGGT CAGCGCATTC ATACCCGTGA CTCTGTGATT
GCCCTGTGGG AGCAGGCGCG AGCGGCGCTG GAAGCCGCTG GCGCCGAGGT GATTGAAGTG
GACTTCCCGC TGGTGTCCAA CTGCGAAGGC GACAGACCCG GCGCACCAAC CGTATTCAAC
CGCGGCATAG TCACTCCTGA GTTTTTGCAC GACGAGCTGT GGGAGCTCTC CGGCTGGGCC
TTCGATGACT TCCTGCGTGC CAATGGTGAC CCCAAGCTCA ATAAGCTGGA GGACGTAGAT
GGGCCGAAGA TTTTCCCCCA CGACCCGGGC ACACTGCCGA ACCGCGAGGG CGATCTGGCC
GCCGGTATGG ATGAGTACGT CAACATGGCC AAGCGCGGCA TCACGCCGTG GAATGAAATT
GCCACAGTCC CCGATGGCCT GCGCGGTCTG GAAAAGACCC GCAAGCTTGA CCTCGAAGAC
TGGATGGATG CGCTTAAGCT GGATGCTGTG CTCTTCCCCA CCGTGGCCGA CGTGGGCCCT
GCCGATGCCG ACGTGAACCC AGCTTCTGCC GATATCGCCT GGAGCAACGG CGTTTGGGTT
GCCAATGGCA ACCTCGCCAT CCGTCACCTG GGCGTACCCA CTGTGACTGT GCCCATGGGC
ATCATGGCCG ATATCGGCAT GCCTGTGGGT CTGACGTTTG CTGGCCGTGC CTACGATGAC
AACGCGCTCT TAAGCCTGGC TTCGGCCTTT GAGTCCACCG GTAATAAGCG CCACATACCA
CCACGCACAC CTAAGCTATC CTGA
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| Protein sequence | MFEVTEVSIA ELRGALESGR TTAVELVKAY LARIEAYDGA DTDTKLNAVV VHNPDALKEA
EASDARRARG ETLGPLDGIP YTAKDSYLVK GLTAASGSPA FKDLVAQRDA FTVERLRANG
AICLGKTNMP PMANGGMQRG VYGRAESPYN AAYLTAPFAS GSSNGAGTAT AASFCAFGLA
EETWSSGRGP ASNNGLCAYT PSRGVISVRG NWPLTPTMDV VVPYARTMAD LLEVLDVVVA
DDSETRGDLW RMQPWVQIPK ASEVRPESYI ALACGADSLK GKRFGVPKMF INKDELAGTS
ENPGIGGPTG QRIHTRDSVI ALWEQARAAL EAAGAEVIEV DFPLVSNCEG DRPGAPTVFN
RGIVTPEFLH DELWELSGWA FDDFLRANGD PKLNKLEDVD GPKIFPHDPG TLPNREGDLA
AGMDEYVNMA KRGITPWNEI ATVPDGLRGL EKTRKLDLED WMDALKLDAV LFPTVADVGP
ADADVNPASA DIAWSNGVWV ANGNLAIRHL GVPTVTVPMG IMADIGMPVG LTFAGRAYDD
NALLSLASAF ESTGNKRHIP PRTPKLS
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