| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2508 |
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| Symbol | |
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| ID | 4604755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3012955 |
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| End bp | 3013965 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781903 |
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| Product | transcriptional regulator |
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| Protein accession | YP_928380 |
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| Protein GI | 119775640 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.207874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAA TATTGCTGCT TGCCATGCCC GGCTGTATGG CGTCGTCAGT GCAGGTTGCA
CTGGATATGT TTTATGTGGC CAATCGCTGC CTGGAAAAAC GCGATGGCAG TGCGCTTATC
GATAATGCGC ATTTCACTGC TCAGGTAGTT TCTCCCGATG GCAAGGCGGT GGAGTCAGCA
TCCGGTCAAT TAATACAGCC GGAGCTGGCC ATGGCTGACG CGAAGATCGC AGATATTGTC
CTGGTCACCA GTCTGTTTGC GGCGTCCGCT TCGCACTCCG AGGTCGACAA TTACCTTACG
GCGCAGCAAG AGGCCGCTGC CTGGCTGAAA GGCATGTCAG ATGCGGGTGC GCTGGTGGCC
AGTGCCTGCA GCGGTACCTT TCTTCTCGCT GAGGCCGGGA TAATGGATGG CCGCGAGGCG
ACCACCCATT GGTTACTGGA GGCTGTATTC CGCCGTCGTT ACCCCCGGGT TCGCTATCAC
GGCGAGCGGA TGCTGTTGGA GTATGGCAAT GTGATTTGCG GCGGTGCGTT TTTTGCTTTT
ACCGACATAC TGCTCAAGTT GCTCGAGCGT TATGGCGGAC GGGAGCTGGC GTTGATGTGT
GCCCGCTTGA TGCTGCTGGA ACCCAATCGC GAGCTGCAAC AACCGTTTAT GCAATCAAGT
GGCAGATCCC ATGAAGATGA GGCAATTCGC AAAGCCGAGC AGTGGCTTAA ACACCATTTT
GATCAGCAAA TCAGTGTCGA TTCGGCCGCC GACGCCATTT CCATGGGCGC CCGTAATTTC
AAGCGGCGTT TTAAAGCGGC CACAGGGGTT ACCCCAATCG AATACCTGCA GCGGCTGCGT
GTCGATGCCG CCAAACGCCA GCTGGAACAC TCCAGTCGTG CCAGTACAGA GGTGATCTGG
TCGGTGGGTT ACGAGGATGC CAGTTCCTTC AGGCGATTGT TCAAGCGCCA AACCGGCGTA
ACCATGGAGC AATACCGGCG CCGCTTTGGC CCTGCCAGTG CCAGCGGGTG A
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| Protein sequence | MPKILLLAMP GCMASSVQVA LDMFYVANRC LEKRDGSALI DNAHFTAQVV SPDGKAVESA
SGQLIQPELA MADAKIADIV LVTSLFAASA SHSEVDNYLT AQQEAAAWLK GMSDAGALVA
SACSGTFLLA EAGIMDGREA TTHWLLEAVF RRRYPRVRYH GERMLLEYGN VICGGAFFAF
TDILLKLLER YGGRELALMC ARLMLLEPNR ELQQPFMQSS GRSHEDEAIR KAEQWLKHHF
DQQISVDSAA DAISMGARNF KRRFKAATGV TPIEYLQRLR VDAAKRQLEH SSRASTEVIW
SVGYEDASSF RRLFKRQTGV TMEQYRRRFG PASASG
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