Gene Sama_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2505 
Symbol 
ID4604752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3010504 
End bp3011316 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID639781900 
Productdihydrodipicolinate reductase 
Protein accessionYP_928377 
Protein GI119775637 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.146607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAC AAGTAAGGGT AGCCGTGATT GGCGCCAGCG GTCGTATGGG CCGTGCACTG 
CTTGAAGCTT GTGACAATCA TGACGGCATC GTCCTTGGCG CCGCCATTGA GCGTGCCGGT
TCGACCCTGG TTGGCGTCGA CGCCGGTGAA ATGGCTGGTA TTGGTCACCT TGGTCTGGCG
TTGGTCGATA ATCTGGATGC GGTTGCCGAT AAGTTTGATG TTCTTATCGA CTTCACTTCA
CCGGAAGGCA CTTTGGCCAA TCTTGAATGG TGTGCCCGGC AGGGTAAGGC GATAGTCATC
GGTACCACCG GCTTTAACCA TGCGCAAAAA GAGCAGGTAG TGGCTTTTGC CGAAGAAACG
CCCGTTGTCA TGGCGCCCAA CATGTCTGTG GGTGTAAACC TGATGTGGAA GCTGCTGGAA
CTGGCGGCCA AAGTCATGGG TGATTACACC GATATCGAAA TCATCGAAGG GCACCACAGA
CACAAGAAGG ATGCGCCGTC CGGTACCGCA CTCAAGATGG GTGAAGTGAT TGCCCAGGCT
CTGGGGCGCG ATCTGGAAAA AGTGGCCGTC TATGGCCGCG AAGGCATCAC AGGTGAACGC
GATCGCGAGA CCATTGGTTT CGCCACCATA CGTGCCGGCG ATCTGGTGGG TGAGCACACC
GCCATGTTTG CCGATATCGG TGAACGACTG GAAATCACCC ATAAAGCATC CAGCCGTATG
ACCTTTGCCA ACGGCGCCAT GCGTGCCGCC AAATGGCTTG CTGAACAAAA ACCTGGTCTT
TACGACATGC AACAGGTGTT GGGACTTAAT TGA
 
Protein sequence
MTGQVRVAVI GASGRMGRAL LEACDNHDGI VLGAAIERAG STLVGVDAGE MAGIGHLGLA 
LVDNLDAVAD KFDVLIDFTS PEGTLANLEW CARQGKAIVI GTTGFNHAQK EQVVAFAEET
PVVMAPNMSV GVNLMWKLLE LAAKVMGDYT DIEIIEGHHR HKKDAPSGTA LKMGEVIAQA
LGRDLEKVAV YGREGITGER DRETIGFATI RAGDLVGEHT AMFADIGERL EITHKASSRM
TFANGAMRAA KWLAEQKPGL YDMQQVLGLN