| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2489 |
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| Symbol | trmB |
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| ID | 4604737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2991349 |
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| End bp | 2992065 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781885 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_928362 |
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| Protein GI | 119775622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.389638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG TAACCACCGC AGAATTTAAC GAGGATGGCG TTTATCTTCG CAAGGTACGC
AGCTTTGTTC TGCGTGAAGG ACGTCTTACT ACCGGGCAGG CCAAGGCGCT GGAAAGCTTC
TGGCCAACCA TGGGTCTCGA CTACAGTCCA CAGGCGATTA ATTTTACTGA AGTATTTGGC
CGCGAAGCTG ATACAGTGCT TGAAATCGGC TTTGGTATGG GTGCCTCTCT GGTTGAAATG
GCTGCCAATG CTCCTGAACT CAACTTTATT GGTGTTGAGG TGCACAAGCC AGGTGTGGGC
GCCTGTTTGG GGGAGGCCGG TAACGCCGGG ATCTCCAATC TGCGGGTTTA CCACCATGAT
GCGGTGGAAG TGCTGGAAAA CGCCATTCCC GATAGCTCAT TGGCGCGGGT GCAGCTGTTT
TTCCCTGACC CATGGCACAA GAAGCGCCAC CACAAGCGCC GCATCGTGCA GCCTGAGTTT
GTTGAGCTTT TACGCCGCAA ACTTAAGATT GGTGGTGTGT TCCATATGGC CACCGACTGG
GAAAACTACG CCGAGCATAT GCTTGAGGTG ATGAGCGCTG CTCCGGGTTA CCAGAATCAG
TCTGATACTC AAACTTATGT GCCACGCCCG GACCATCGTC CACTGACCAA GTTTGAAAAC
CGTGGTCAGC GCCTCGGTCA CGGTGTGTGG GACCTGATGT TTGAGCGTGT TGAATAA
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| Protein sequence | MSEVTTAEFN EDGVYLRKVR SFVLREGRLT TGQAKALESF WPTMGLDYSP QAINFTEVFG
READTVLEIG FGMGASLVEM AANAPELNFI GVEVHKPGVG ACLGEAGNAG ISNLRVYHHD
AVEVLENAIP DSSLARVQLF FPDPWHKKRH HKRRIVQPEF VELLRRKLKI GGVFHMATDW
ENYAEHMLEV MSAAPGYQNQ SDTQTYVPRP DHRPLTKFEN RGQRLGHGVW DLMFERVE
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