Gene Sama_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2479 
Symbol 
ID4604727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2981925 
End bp2982473 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID639781875 
Productprotein of unknown function YGGT 
Protein accessionYP_928352 
Protein GI119775612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.619107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGA TGGTTTTTTT AGTAAACACC CTGTTTGATC TCTATCTGAT GGTGGTGATT 
TTACGGATTT GGCTGCAACT GGTCAGAGCC GATTTTTATA ACCCTTTCAG CCAGTTTATC
GTTAAAGCGA CTCACCCTAT TGTAGCGCCA CTGCGCCGCG TTTTGCCCCC CATCGGCAAG
CTGGACAGCG CCTCGCTGGT ACTGGCGTTT GCCGTGGTGG TAGTGAAAAT GTTGGTACTG
ACACTGATAG CCGGTGCCAC CATAAACCTG CCCACCATAC TTGCTTACTC AGTGGTGGCC
GTAATTAAAA ATGCCGGTGT GCTCTTCTTC TGGATGCTGC TTATCCGCGC CATCCTGAGC
TGGTTCAATC AGGGTTATAA TCCCTTTATC ATGGTGATAT CCCAGCTCAC AGAGCCTGTG
CTGGCGCCGG TTCGCCGTGT TATCCCACCC ATTGGTGGCC TTGACCTCTC TGTACTGGTG
GTCTTTATTG GCCTTAATTT CATCAACATG TTACTCGCCC AATACGTGCC TTTCTGGGCG
TTTATCTGA
 
Protein sequence
MNAMVFLVNT LFDLYLMVVI LRIWLQLVRA DFYNPFSQFI VKATHPIVAP LRRVLPPIGK 
LDSASLVLAF AVVVVKMLVL TLIAGATINL PTILAYSVVA VIKNAGVLFF WMLLIRAILS
WFNQGYNPFI MVISQLTEPV LAPVRRVIPP IGGLDLSVLV VFIGLNFINM LLAQYVPFWA
FI