| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2478 |
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| Symbol | |
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| ID | 4604726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2981064 |
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| End bp | 2981879 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781874 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_928351 |
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| Protein GI | 119775611 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0810404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA AAAAAATCTG TTTCATCGGT GCCGGAAACA TGAGCCGCGC CATCATTGGC
GGCCTCATCA AGAGCGGCTA CAGTGCCAGC CTCATCACGG CAACCAATCC AAGCTTGCCA
AAACTCGACG CCCTGGCAGC CGACTATGGC ATCAATACTT CCCAGGACAA TGTACCAAGC
GCCTCGGCTG CCGATGTGAT AGTGCTTTCA GTTAAGCCTC AGCTTATGCA GGCAGTATGT
GAGTCACTTG CCGGTGTCGT CGATGATAAA TTGCTGATTA CCATAGCCGC CGGTATCCCA
GAAAACCGCT ACCATGATTA CTTCGGCAAA CAGGTCAAGC TTATCCGCAC TATGCCCAAC
ACCCCCATGC AGTTGGGCCT TGGGATGACA GGTCTTTATG CCCCTGCCGG CATGCCTGAT
GAAGACAAGG CCTTTGCTGA GTCGCTGATG CGCGCCTGTG GTGATATTGT CTGGGTGAAC
GAAGAGTCGG GTATAGATAA GGTTATTGCA CTGGCAGGCA GTTCACCGGC CTACTTTTTC
CTCTTTATCG AGGCCATGAT TGAAGCAGGT GTCGAAATGG GGCTGCCAGA GGCCGACGCC
CGTACCCTGG CGCAGCAAGC GGCCGTGGGT GCCGCTGCCA TGGTAAAACA AAACCCGGGG
CTGACCCCAG CCGAGCTCAG GGCCAATGTC ACATCCAAAG GGGGCACCAC GGCCGAAGCC
ATCGCCACTT TTGAAGCAGG CGGGCTGCGC ACACTGGTAA AAGATGCCAT GGGCAATTGT
ATTAAGCGGG CTGAAGAAAT GGCCCGGAAT TTTTAA
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| Protein sequence | MQNKKICFIG AGNMSRAIIG GLIKSGYSAS LITATNPSLP KLDALAADYG INTSQDNVPS
ASAADVIVLS VKPQLMQAVC ESLAGVVDDK LLITIAAGIP ENRYHDYFGK QVKLIRTMPN
TPMQLGLGMT GLYAPAGMPD EDKAFAESLM RACGDIVWVN EESGIDKVIA LAGSSPAYFF
LFIEAMIEAG VEMGLPEADA RTLAQQAAVG AAAMVKQNPG LTPAELRANV TSKGGTTAEA
IATFEAGGLR TLVKDAMGNC IKRAEEMARN F
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