Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2474 |
Symbol | |
ID | 4604722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2977327 |
End bp | 2977869 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781870 |
Product | glutathione peroxidase, putative |
Protein accession | YP_928347 |
Protein GI | 119775607 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA CTGTTGAGAC TCAAAACGCC GCGGAGCACA CTGCGGGCAC GCAAGTCGCT TGTCCTGCGT ATCTCAATCA CGAGTTTCGT AAGCTGCACT CAAGTGAGTC GGTGAACCTT TGCGATATTG CCGCCGGCAA ACCAGTGCTC TTTATCAATA CCGCCAGCAA CTGCGGCTTT ACGCCACAGT TCAAGGCGCT TGAGCTGCTC AACAAGGAAT ATGGCCCCAA GGGACTGGTG CTGGTGGGTT TTCCATCCGA TGACTTCTTT CAGGAAGAAA ACGATGAAAA GGATACCGCC AAGGTATGCT ACCTCAACTA TGGTGTGACC TTTACCATGC TGGCCACATC GGCGGTGCGT GGAGGTGATG CCAATCCTGT GTTTGAGTAT TTGGGCGAAA AAGCCGGTTC ACCCAAGTGG AATTTCTACA AGTATCTGGT GTCTGCCGAT GGCAAAGAAG TGACGGCTTT CAACTCCCGT GTAAAGCCTG ACAGCCTTGA GCTTAAAGCC GCTATCGAGG CTGCCTTGCC CAAAGCACTC TGA
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Protein sequence | MAETVETQNA AEHTAGTQVA CPAYLNHEFR KLHSSESVNL CDIAAGKPVL FINTASNCGF TPQFKALELL NKEYGPKGLV LVGFPSDDFF QEENDEKDTA KVCYLNYGVT FTMLATSAVR GGDANPVFEY LGEKAGSPKW NFYKYLVSAD GKEVTAFNSR VKPDSLELKA AIEAALPKAL
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