Gene Sama_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2474 
Symbol 
ID4604722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2977327 
End bp2977869 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID639781870 
Productglutathione peroxidase, putative 
Protein accessionYP_928347 
Protein GI119775607 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CTGTTGAGAC TCAAAACGCC GCGGAGCACA CTGCGGGCAC GCAAGTCGCT 
TGTCCTGCGT ATCTCAATCA CGAGTTTCGT AAGCTGCACT CAAGTGAGTC GGTGAACCTT
TGCGATATTG CCGCCGGCAA ACCAGTGCTC TTTATCAATA CCGCCAGCAA CTGCGGCTTT
ACGCCACAGT TCAAGGCGCT TGAGCTGCTC AACAAGGAAT ATGGCCCCAA GGGACTGGTG
CTGGTGGGTT TTCCATCCGA TGACTTCTTT CAGGAAGAAA ACGATGAAAA GGATACCGCC
AAGGTATGCT ACCTCAACTA TGGTGTGACC TTTACCATGC TGGCCACATC GGCGGTGCGT
GGAGGTGATG CCAATCCTGT GTTTGAGTAT TTGGGCGAAA AAGCCGGTTC ACCCAAGTGG
AATTTCTACA AGTATCTGGT GTCTGCCGAT GGCAAAGAAG TGACGGCTTT CAACTCCCGT
GTAAAGCCTG ACAGCCTTGA GCTTAAAGCC GCTATCGAGG CTGCCTTGCC CAAAGCACTC
TGA
 
Protein sequence
MAETVETQNA AEHTAGTQVA CPAYLNHEFR KLHSSESVNL CDIAAGKPVL FINTASNCGF 
TPQFKALELL NKEYGPKGLV LVGFPSDDFF QEENDEKDTA KVCYLNYGVT FTMLATSAVR
GGDANPVFEY LGEKAGSPKW NFYKYLVSAD GKEVTAFNSR VKPDSLELKA AIEAALPKAL