Gene Sama_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2471 
Symbol 
ID4604719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2975939 
End bp2976268 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content52% 
IMG OID639781867 
Producttranslation initiation factor Sui1 
Protein accessionYP_928344 
Protein GI119775604 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.827071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG ATCCGAACGT ATTACTGGTG TACAGCACAG ATAAGGGCAG AATCGATGAG 
CCCACACCGG AAGTTGAGGT ACCCAAAGGC GACGGCGTGG TTCGCATCCA CAGAGACAGT
AAAGGCCGCA AGGGAAAGGG TGTCAGCGTG ATAAGCGGCC TGGGACTCGA CCAGGGAGCA
CTCAAGGAGC TGGCTCAAAA GCTAAAGAAG CAGTGTGGCT GTGGTGGAAC AGTAAAGGAC
TTCGACATTG AAGTCCAAAC CGATAACCGG GAACTGCTAA AGGGCCTGCT TGAAAAACAA
GGATTTACCG TAAAGCTTGC GGGAGGGTAA
 
Protein sequence
MRIDPNVLLV YSTDKGRIDE PTPEVEVPKG DGVVRIHRDS KGRKGKGVSV ISGLGLDQGA 
LKELAQKLKK QCGCGGTVKD FDIEVQTDNR ELLKGLLEKQ GFTVKLAGG