Gene Sama_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2463 
Symbol 
ID4604712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand+ 
Start bp2970453 
End bp2971064 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID639781860 
Producthypothetical protein 
Protein accessionYP_928337 
Protein GI119775597 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000441132 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGT GGCTCATCGG TATACTGGCC GAAGCCATGA CAGGCGCCCT CGCCGCCGGA 
CGCAAACAGA TGGATCTCTT TGGGGTGGTG ATCATTGGGC TGGTGACCGC CATCGGCGGC 
GGCACCCTGA GGGATATGCT CCTTGGCAAC TATCCGTTGA TTTGGATTGC CAACTGGCAC 
TATCTGATTG CCATTGCCGC AGCCTCGCTG CTAACGGTAC TTATCGCCCC ACTGATGCGC 
TATCTTGGCC GTTTATTCCT GGCCATTGAT GCCCTTGGTC TGGCGGTGTT TTCCATTACC 
GGTGCCCAAA AAACCCTGAT GCTGGGCTAC AGCCCCGTGG TCGCTGTGGC CATGGGGGTG 
GTGACCGGCG TCTTTGGCGG TGTGCTCAGA GACATTTTGT GCAATGAGAT CCCGCTGATT 
TTCAGACGGG AATTTTATGC GCTGGCATCC TTACTTACCG CCAGCCTTTA TGTGCTGCTG 
GCCCTCAGTG GTTTTGGCGG CTGGCCAAGC CTGCTGGGCT GCTTGCTGCT GGGATTCGGG 
CTGCGTATGT GTGCCATCCG TTACCACTGG TCGATGCCAA CCTTTAACTA TCAGAGTGAT 
GCTCACCACT GA
 
Protein sequence
MLLWLIGILA EAMTGALAAG RKQMDLFGVV IIGLVTAIGG GTLRDMLLGN YPLIWIANWH 
YLIAIAAASL LTVLIAPLMR YLGRLFLAID ALGLAVFSIT GAQKTLMLGY SPVVAVAMGV 
VTGVFGGVLR DILCNEIPLI FRREFYALAS LLTASLYVLL ALSGFGGWPS LLGCLLLGFG 
LRMCAIRYHW SMPTFNYQSD AHH