| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2458 |
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| Symbol | |
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| ID | 4604707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2966439 |
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| End bp | 2967767 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781855 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_928332 |
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| Protein GI | 119775592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACGACC CATTAATCAG CACCAATGCG GCGCAGCAAG CCTTGCCGTC CACTTTTTGG
TCCGGCACCA CTGAACCCTT ACCTGAGTCA CCAAGGCTAC AGGGACACCT CCAAACCGAT
GTGATAGTGA TTGGCGGCGG TTTCACAGGA CTGCTCACCG CCTATTATCT GGCGACCGAA
TATGGCAGGC AGGTCACCTT ACTCGAAGCC AACCGAATTG GATTTGGGGC CAGCGCCCGT
AATGGTGGCT TTGTACTTAA GGGCTCGGGT CGCCTGGGGT ATGGTCAAAT GGCCAAGCGG
TGGGATTTGG ACACGGCAAA GGGGATTTAT CAGGAGTTCT CCGAGGCGGT TGCCCGGGTG
GAAGGGCTTA TCCAGGATGG CAAGATAGAC TGTAATCCGC AGGAAAAGGG GTATCTTAAA
ATTGCCCATA GCCCCAAGGC CATGAAAACA CTGCAGGCCG GGGCCGATTT TATTGCCCGC
CACATGGGGC AGGGCGCCGA ATTTATCTGC CCGGCGAGAC TGAGAATTGA TTATCTCAAT
CACCATCAGT CCTATGGCGC GCTGCGTCTC GCCGATGGAT TTGGCCTGAA TCCGCTGAAA
TTGCTGCAGG GCTATGCCCG TCTGGCCCGA GAAGCTGGCG TACAAATCTT TGAGCAAAGT
ACCGTGCTTG CCAGTGTGCG CACTGCCAAA GGTTTCAGCC TGGAGACTGA AGCGGGGCGC
ATTGACGCCA ATGCCATGGT GTTTGCTGGC AATGCCTATA CTCAGCCCGG TTTGACCGAG
ACTCTCACGG GGCGCTTTTT GCCCATTTTG AGCAACGTGA TAGTGACTGA GCCCCTGTCT
GAAGCCGTGC TGGCCGAGGC CGGGCTATAC AGCCGCCAGG TGGCCATGGA TACCCGCATC
CTTAAATACT ATTACCGCTT GTTACCGGAA AACCGGTTGC TCTTTGGTGG GCGAGGCGCC
GTATGGGGCC GTGACGCCGA CAATTCTGTG TACCCGGCGC GTTTGAAAGA GGCCATGAAT
AAGGCGTTTC CGGCCCTGAC AGATGTGGGT TTAAGCCACA CTTGGCACGG CTGGCTGGCG
GCATCCCTCG ATGATATGCC CCATGTGTAT ACCCGAGGTG GCGAAGGCTA CAGCCTGGGA
TATTGCGGCG CAGGTGTATC TTTCAGCAGC CAGGCGGCCT GGCGGCTTGC GGGCATGTTA
AGTGGTAAGG CGGCGCCGTC ATTGCCGCTT TATGGCACGC CATTGCCAGC TTTTCCCCTG
GCGCCGCTCA GGCGTGTGGG GCAGTGGGCC TTTTATCATT ACGGCCGCTT TATCGATGCT
TGGAGCTGA
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| Protein sequence | MYDPLISTNA AQQALPSTFW SGTTEPLPES PRLQGHLQTD VIVIGGGFTG LLTAYYLATE
YGRQVTLLEA NRIGFGASAR NGGFVLKGSG RLGYGQMAKR WDLDTAKGIY QEFSEAVARV
EGLIQDGKID CNPQEKGYLK IAHSPKAMKT LQAGADFIAR HMGQGAEFIC PARLRIDYLN
HHQSYGALRL ADGFGLNPLK LLQGYARLAR EAGVQIFEQS TVLASVRTAK GFSLETEAGR
IDANAMVFAG NAYTQPGLTE TLTGRFLPIL SNVIVTEPLS EAVLAEAGLY SRQVAMDTRI
LKYYYRLLPE NRLLFGGRGA VWGRDADNSV YPARLKEAMN KAFPALTDVG LSHTWHGWLA
ASLDDMPHVY TRGGEGYSLG YCGAGVSFSS QAAWRLAGML SGKAAPSLPL YGTPLPAFPL
APLRRVGQWA FYHYGRFIDA WS
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