Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2441 |
Symbol | |
ID | 4604690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2938417 |
End bp | 2939160 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639781838 |
Product | hypothetical protein |
Protein accession | YP_928315 |
Protein GI | 119775575 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.175733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAG CCCTCTTCAC GCCTTGCCTG GTAAACCAGA TGATGCCCGA GGTGGCCATT GCCACCCTCT CGCTGCTGGA AAAACTTGGC CATCAGGTCA TCTTCCCTCA GGGGCAAACC TGCTGTGGTC AGCCTATGAC CAACTCTGGT TGCTTTAACG AAGCCAAAAA CACCACCCTG AAACTGCTCA ATGCCTTCAA GGGCGTGGAG TGTGATGCCA TCGTCTGCCC GGCAGCGTCC TGCCTGGTGG CGGCCAAGGA AAACTTTCAC GAGTTCGACA AGAGCCCCGA AGCCCAGGCG GTTATCGACA AGCTCTACGA GCTGACCGAG TTTTTACACG ACGTAGCACC CGTGACGCAA TTTAACCGTC CTGTGGCGAA AAAGCTCAGC CTGCAGCTGT CCTGCCACGG CATCCGTATG CTGGACCTGG CGGCACCGAG TGAATACATG GGCCCCCGCT ACAACAAAAT GGAAGCCCTA CTGTCACGCA TCGACGGCGT AGAGATTTGT TACCCCGAGC GCCTGGATGA ATGTTGTGGC TTTGGCGGTA CTTTCAGCGT CGATGAGGGC GCTGTATCGG CCAAAATGGG CAAAGACAAG GCCCAGGCCC ACGCCAATAC CGGAGCGGAC TATGTGGTGG GTTTTGACCC CAGCTGCCTG ATGCACCTGG ACGGTACCAT TCGCCGCAGA CAATTGCCCA TCGAGACCCG CCATCTGGCG CAAATTCTCA ACGACGCTCT GTAA
|
Protein sequence | MKIALFTPCL VNQMMPEVAI ATLSLLEKLG HQVIFPQGQT CCGQPMTNSG CFNEAKNTTL KLLNAFKGVE CDAIVCPAAS CLVAAKENFH EFDKSPEAQA VIDKLYELTE FLHDVAPVTQ FNRPVAKKLS LQLSCHGIRM LDLAAPSEYM GPRYNKMEAL LSRIDGVEIC YPERLDECCG FGGTFSVDEG AVSAKMGKDK AQAHANTGAD YVVGFDPSCL MHLDGTIRRR QLPIETRHLA QILNDAL
|
| |