Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2426 |
Symbol | |
ID | 4604675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2920901 |
End bp | 2921986 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781823 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_928300 |
Protein GI | 119775560 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAACC TGTTCTTATA TTGCCGTGCC GGTTATGAAA AAGACTGTGC GGCTGAAATT CAGCAGCGGG CCGCCGAGCT CGGCATTGGT GGTTTCGTCA AAGCCAACCG CGACGATGCT TATGTGGTAT TTCAGGGATT CAGCCCTGAT GATGGTGATC GCCTCGCCAA AGAATTGCCT CTGGACTCGC TGATTTTTGC CCGGCAGATG TTCGCCTGTG GCGATTTGCT TGATGACTTT TCACCTGAAG ACAGGGTTAC CCCTATTGCT GAGAGCCTGA CGGAAGTTGA ACGGGCAGGG GAACTGCGGG TAGAAACCCC AGATACCAAT GAAGCCAAAG AGCTTTCTGC CTTCTGCCGT AAATTCACAG TGCCCCTGCG TCAGGCATTG AAAAAGCGTG GTGTGCTGCT GGACAAAGAA AGCAGCCGTC GTCCCATAGT GCATGTGTGC TTTGTGGCGC CCAACAAGGC TTTTACCGGT TATTCGTTGT CAAACAACAG CTCTCCACAC TTTATGGGGA TCCCGCGGCT AAAATTTCCG GCGGACGCTC CGAGTCGTTC GACCCTTAAA TTGGACGAAG CCTTTATCCA TTTTATTCCC CGTGAAGAGC ACGAAACCCG TCTTCGCAGT GGACTCAATG CGGTGGATTT GGGCGCTTGT CCCGGTGGCT GGACTTATCA ATTGGTGCGC CGTGGCATGA TGGTGCACGC CATCGATAAT GGCCCCATGA ACCATGATCT GATGGAAACC GGACAGGTGA CGCACCACCG CGCTGACGGT TTCAAATTTG AGCCAGCCCG CCGTAATATC TACTGGCTGG TATGTGACAT GGTGGAAAAG CCTGCCCGTG TGGCTGAATT GATGGAATAC TGGGCGATTC AGGGCTGGTT TAAAGAGGCG ATTTTTAACC TCAAACTACC GATGAAAAGC CGCTACAAAG AGGTGTCGCA GATCCTCGCC AATATGCATG CCATCCTTAA GGAAAATGGC ATTCACGAGT TTCATCTGGC CTGTAAGCAC CTTTATCACG ATCGTGACGA AGTGACTGTA CACCTGTGGC TCCGCCCAAG TTCACCTTGG ATTTGA
|
Protein sequence | MKNLFLYCRA GYEKDCAAEI QQRAAELGIG GFVKANRDDA YVVFQGFSPD DGDRLAKELP LDSLIFARQM FACGDLLDDF SPEDRVTPIA ESLTEVERAG ELRVETPDTN EAKELSAFCR KFTVPLRQAL KKRGVLLDKE SSRRPIVHVC FVAPNKAFTG YSLSNNSSPH FMGIPRLKFP ADAPSRSTLK LDEAFIHFIP REEHETRLRS GLNAVDLGAC PGGWTYQLVR RGMMVHAIDN GPMNHDLMET GQVTHHRADG FKFEPARRNI YWLVCDMVEK PARVAELMEY WAIQGWFKEA IFNLKLPMKS RYKEVSQILA NMHAILKENG IHEFHLACKH LYHDRDEVTV HLWLRPSSPW I
|
| |