Gene Sama_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2426 
Symbol 
ID4604675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2920901 
End bp2921986 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID639781823 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_928300 
Protein GI119775560 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TGTTCTTATA TTGCCGTGCC GGTTATGAAA AAGACTGTGC GGCTGAAATT 
CAGCAGCGGG CCGCCGAGCT CGGCATTGGT GGTTTCGTCA AAGCCAACCG CGACGATGCT
TATGTGGTAT TTCAGGGATT CAGCCCTGAT GATGGTGATC GCCTCGCCAA AGAATTGCCT
CTGGACTCGC TGATTTTTGC CCGGCAGATG TTCGCCTGTG GCGATTTGCT TGATGACTTT
TCACCTGAAG ACAGGGTTAC CCCTATTGCT GAGAGCCTGA CGGAAGTTGA ACGGGCAGGG
GAACTGCGGG TAGAAACCCC AGATACCAAT GAAGCCAAAG AGCTTTCTGC CTTCTGCCGT
AAATTCACAG TGCCCCTGCG TCAGGCATTG AAAAAGCGTG GTGTGCTGCT GGACAAAGAA
AGCAGCCGTC GTCCCATAGT GCATGTGTGC TTTGTGGCGC CCAACAAGGC TTTTACCGGT
TATTCGTTGT CAAACAACAG CTCTCCACAC TTTATGGGGA TCCCGCGGCT AAAATTTCCG
GCGGACGCTC CGAGTCGTTC GACCCTTAAA TTGGACGAAG CCTTTATCCA TTTTATTCCC
CGTGAAGAGC ACGAAACCCG TCTTCGCAGT GGACTCAATG CGGTGGATTT GGGCGCTTGT
CCCGGTGGCT GGACTTATCA ATTGGTGCGC CGTGGCATGA TGGTGCACGC CATCGATAAT
GGCCCCATGA ACCATGATCT GATGGAAACC GGACAGGTGA CGCACCACCG CGCTGACGGT
TTCAAATTTG AGCCAGCCCG CCGTAATATC TACTGGCTGG TATGTGACAT GGTGGAAAAG
CCTGCCCGTG TGGCTGAATT GATGGAATAC TGGGCGATTC AGGGCTGGTT TAAAGAGGCG
ATTTTTAACC TCAAACTACC GATGAAAAGC CGCTACAAAG AGGTGTCGCA GATCCTCGCC
AATATGCATG CCATCCTTAA GGAAAATGGC ATTCACGAGT TTCATCTGGC CTGTAAGCAC
CTTTATCACG ATCGTGACGA AGTGACTGTA CACCTGTGGC TCCGCCCAAG TTCACCTTGG
ATTTGA
 
Protein sequence
MKNLFLYCRA GYEKDCAAEI QQRAAELGIG GFVKANRDDA YVVFQGFSPD DGDRLAKELP 
LDSLIFARQM FACGDLLDDF SPEDRVTPIA ESLTEVERAG ELRVETPDTN EAKELSAFCR
KFTVPLRQAL KKRGVLLDKE SSRRPIVHVC FVAPNKAFTG YSLSNNSSPH FMGIPRLKFP
ADAPSRSTLK LDEAFIHFIP REEHETRLRS GLNAVDLGAC PGGWTYQLVR RGMMVHAIDN
GPMNHDLMET GQVTHHRADG FKFEPARRNI YWLVCDMVEK PARVAELMEY WAIQGWFKEA
IFNLKLPMKS RYKEVSQILA NMHAILKENG IHEFHLACKH LYHDRDEVTV HLWLRPSSPW
I