| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2416 |
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| Symbol | |
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| ID | 4604665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2905885 |
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| End bp | 2907759 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781813 |
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| Product | peptidase M61 |
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| Protein accession | YP_928290 |
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| Protein GI | 119775550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.353738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.453663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTCT TGTTATACTC AAGCCCTTTT ATTGGATTCC ATCATACCTA TAAGGACAAC
AGAGTGGAAC AAAAGTTAAC TGCCTTTTTA CCCTTGTCAC TGTTTATTTC GACTTGTGCA
TTTGCCGGTG TGGATTATCA CATCGATCTT TCTTCTCCGA CCCATCATCT GGCCAAAGTC
GAAGTACGTT TTCCCAAGGT GGAGGCCGGA GACTTTCCGG TGAATTTACC CGTATGGCGA
ACCGGTAAAT ATCAGGTGTT GCCTCTGGCT GACGGCGTGC GCGCCTTTCA GGCCATAGAT
GCCAGTGGCA ATGCTGTGCC GTGGCGACGC AGCGCCAGCG GCGAGTGGGT GTTGAGTCTG
CCCGTGGCGT CGGAAGTGAC AGTGTCCTAT CAGCTCTATG CCGACGAGCT TGGGCTCAGA
ACCCGCCATA TTGATGCCAC CCATGCTTAT CTGGATGCCA GCAGCGTGTT TATGTACAGT
CCAAAGTTTC GGGATCAGGA ACTCAGTGTC AGTCTCACGG TTCCGGAAGG CTGGCAAAGC
TATTCGGGGA TGAGCAAGGG GGACGGTGCC CACAGCTTTG TGGCGCCCAA CTACGATGTG
CTGGTGGACT CACCCATCGA AACCGGTGTA AGCCATCACC GTCGTTTTTC ATCCGCCAAG
CGTGACTATG AGCTGGTTGT GTGGGGAGAG GGGAACTATG ACCTGGATAA AATGGTCACC
GACTTGACCA AGCTTGGCAC CCAGGCCAGC GCCATATGGG ACGGTTTCCC CTTCGAGCGT
TATGTTTATA TGGTGCACGC CACCAGTGGA GCCCGGGGGG CCACCGAGCA TCTCAACTCC
ACCGTCATTC AGCTGCCGCG TTTTATGTTC CGTGAGCGCA AGGACTATCT GAGATTTATC
TCCACCGCCT CCCACGAGTT TATCCATACC TGGAACGTGA AAGCCTATCG CCCAGCCGGT
TTGGTGCCCT ATGACTATCA ACAGGAAGGA CTGACCTCTT TGCTGTGGAT AGCCGAAGGC
TCCACCAGTT ACTTTCAGCA TCAGCTGCTG GCGCGGGCGG GCGTGATCAC CGCCAAAGAG
CTGCTGGAAG ATATCGCCGG GCGTATTGAC CGTCATCAGC AAACCCCCGG CCGTGAAATC
CAGTCGGTGG CCGAGGCCAG TCTCGGGGAG TGGGTTGCTC AGGGCGGCGA TTATGCCCAT
AACCACAGCG TAAACATTTA CTCTGAGGGG TATATGGCGT CGCTGGCCCT GGATATGGCG
ATTCTCTCTG ATACCAAACT CAAGCACTCC TATCGCGACG TCCACCGGGC CTTATACCGT
GATTTTGCTG TGCCCAAGGG CTACCGCGTC GACGATGTTA AAGGCATTCT GACCCAACTG
ACCGGCAAGG ACTATGGCCC CTGGTGGCAG AGTCATATCG ATTCCCCCAT GGTGCTGGAT
TTTGATGAGC TGTTGTCCCG CGCCGGGTTG AGACTGGTTT ATGGCAAAGA CGACGGCGAT
GGCAAAACCA AAGTCTACCC GGGCTTTAGC CTGGTATCAG GCAGTCTCAA GCTGCAAACT
CTCGATAGGG GTGGCAAGGC ATGGGAAGCA GGCCTGGTTG CCGGTAACGA GCTGGTTGCC
ATCAATGGTC TCAAGGTCAC GGGTGAGGGC TTTGATAAAC GTCTGGCCGA TTTCAAGGCA
GGCGACAGCA TCACTGTGAC CTACTTTGCT GACGACAGCC TCAAGCAGAC CACATTGGTA
CTTGGCGAGC GGCCGGAGGG TAAAGCGGCG CTCAAACCGC TGGAGAAGGT GTCTGACAAG
CAAAAGGCCT TCTTCAAGGC CTGGCTGGGC ATCGACTGGC CGTTCGACAA AAAAGGCGAG
TTCAGAAAGA GTTGA
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| Protein sequence | MNVLLYSSPF IGFHHTYKDN RVEQKLTAFL PLSLFISTCA FAGVDYHIDL SSPTHHLAKV
EVRFPKVEAG DFPVNLPVWR TGKYQVLPLA DGVRAFQAID ASGNAVPWRR SASGEWVLSL
PVASEVTVSY QLYADELGLR TRHIDATHAY LDASSVFMYS PKFRDQELSV SLTVPEGWQS
YSGMSKGDGA HSFVAPNYDV LVDSPIETGV SHHRRFSSAK RDYELVVWGE GNYDLDKMVT
DLTKLGTQAS AIWDGFPFER YVYMVHATSG ARGATEHLNS TVIQLPRFMF RERKDYLRFI
STASHEFIHT WNVKAYRPAG LVPYDYQQEG LTSLLWIAEG STSYFQHQLL ARAGVITAKE
LLEDIAGRID RHQQTPGREI QSVAEASLGE WVAQGGDYAH NHSVNIYSEG YMASLALDMA
ILSDTKLKHS YRDVHRALYR DFAVPKGYRV DDVKGILTQL TGKDYGPWWQ SHIDSPMVLD
FDELLSRAGL RLVYGKDDGD GKTKVYPGFS LVSGSLKLQT LDRGGKAWEA GLVAGNELVA
INGLKVTGEG FDKRLADFKA GDSITVTYFA DDSLKQTTLV LGERPEGKAA LKPLEKVSDK
QKAFFKAWLG IDWPFDKKGE FRKS
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