Gene Sama_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2414 
Symbol 
ID4604663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2901872 
End bp2902309 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID639781811 
ProductOsmC family protein 
Protein accessionYP_928288 
Protein GI119775548 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.591266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTTTC GTTTGCAAAC CCGCTGGCAG GCCAGCGACA CCCCCGAGGG CGAGTTCAGC 
CGCGATCACC ACATCACCTT TGGCAGCGGC CAGACCATCG AGGCTTCCTC TGCACCGGAA
TACAAGGGGA ATCCCGCCAT GGTGAACCCG GAGGAAAGCC TGCTGGCTGC GCTGTCGTCA
TGCCATATGC TCACCTTCCT GGCAATTGCG CACCTTAAAC GACTGCCAGT GAAAAGCTAT
GAGGACTGTG CATCGGCAGA ACTTGGGAAA CGCGACAGTG GCAAGCTGGC CGTGACCTAT
ATGCAGCTCA ATCCCACGGT GGAATTTATG GATGGGGTGG AGGTAAGCCG CGACACCCTG
GAAAAGATGC ACGAAAAAGC CCATGCCAAC TGCTTTATCG CCAACAGTCT TGATTGTGAA
GTGGAAATCC GCTTTTAA
 
Protein sequence
MSFRLQTRWQ ASDTPEGEFS RDHHITFGSG QTIEASSAPE YKGNPAMVNP EESLLAALSS 
CHMLTFLAIA HLKRLPVKSY EDCASAELGK RDSGKLAVTY MQLNPTVEFM DGVEVSRDTL
EKMHEKAHAN CFIANSLDCE VEIRF