| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2411 |
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| Symbol | |
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| ID | 4604660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2897450 |
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| End bp | 2899003 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781808 |
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| Product | proton/peptide symporter family protein |
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| Protein accession | YP_928285 |
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| Protein GI | 119775545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTA CAACAGGGCA ATGGCCAAAA CAAATCCCCT ACATTATTGC CTCTGAAGCC
TGTGAGCGGT TCAGCTTTTA TGGCATGCGC AACATTCTCA CGCCGTTTTT GATGACGGCA
CTGCTGCTGT CAGTGCCGGA ACATCTCAGG GCCGGCGAAG CCAAGGATGT GTTTCACTCC
TTTGTGATTG GTGTGTACTT CTTTCCACTG TTGGGGGGCT GGATTGGGGA CAGGCTCTTT
GGTAAGTACA ACACCATCTT GTGGTTGTCG CTGCTTTACT GTGTTGGCCA TGCTTTTCTG
GCCATTTTTG AGGACAGTAA AACCGGCTTT TATACCGGCC TGTTTTTGAT TGCGCTGGGC
TCGGGTGGGA TAAAACCCCT GGTGTCCTCT TTTATGGGCG ACCAATTTGA TCAGAGTAAC
AAGTCATTGG CCCAAAAAGC GTTTGACATG TTTTACTTCA CTATCAATTT TGGCTCTTTC
TTCGCCTCTT TGAGTATGCC CTTGCTGCTG AAACATTTCG GTGCTGCGGT TGCCTTTGGT
ATTCCCGGGG TGCTGATGTT TATCGCTACC GTCTTTTTCT GGGCGGGGCG TCACCGCTAT
GTGCATATGC CCCCAGAGCC CAAAAATCCC AACGGTTTTT TGCCTGTTAT CAAAACGGCG
TTACTCAGTC CGGGTGCAAA TCGTTTTGGT CTGGCGCTGG CGCTGATGGG TACAGTGCTC
GCCGTGATTG CCCTTGGATT TATGCCCTCC CTCGGGCTGG TGACCTCACT GTGTCTGGCG
TTGGTACTGC TGATGGGGTT TGTAGGCAGC GGCGCCTCCA TGCAGCTGGA CAGAGCCAGG
GCACGCCATG GTGATGAGGC TGTGGAGGGC GTCAGGGCGG TGATGCGGAT ATTGGTACTC
TTTGCCCTGG TTACGCCTTT CTGGTCGCTG TTCGACCAAA AGGCATCCAC CTGGATTTTG
CAGGCCAATG AGATGACCAA ACCGGAGTGG TTTGAACCGG CCATGATGCA GGCATTGAAT
CCACTCCTGG TAATGATCCT TATCCCCTTC AATAACTTTG TGCTGTACCC CACGCTGGAG
CGATGGGGAT TCAGGTTAAC GGCTCTGGGC AAAATGGCGT CTGGCATCGC CTTTTCCGGC
CTGTCCTGGG TGGTAATAGG CAGCATTCAA TTGATGATGG ATGGCGGCAG CGCCGTTTCG
ATTGTGTGGC AGGTTTTGCC CTATGCGTTG CTTACCTTTG GTGAGGTGTT GGTGTCGGCC
ACCGGGCTTG AGTTTGCCTA CAGTCAGGCG CCAAAGACCA TGAAGGGCAC CATTATGAGT
TTCTGGACCC TGTCGGTGAC CGTGGGTAAC CTCTGGGTGT TGCTTGCCAA TGCCAGTGTG
AAGGGGCAGG GCATGACTGA TTGGATTGCC GGTACAGGAT TGTCGGTGAC GGCGTTTCAA
ATGTTCTTTT TTGCGGGCTT CGCTTTGGTG GCCGCAGCCG TGTTTGCCCT GTACGCCAGA
AATTATCGAA TGCAGGACCA TTACCGTGAG GCAGCACAAG TCTCAGCGGT CTGA
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| Protein sequence | MTTTTGQWPK QIPYIIASEA CERFSFYGMR NILTPFLMTA LLLSVPEHLR AGEAKDVFHS
FVIGVYFFPL LGGWIGDRLF GKYNTILWLS LLYCVGHAFL AIFEDSKTGF YTGLFLIALG
SGGIKPLVSS FMGDQFDQSN KSLAQKAFDM FYFTINFGSF FASLSMPLLL KHFGAAVAFG
IPGVLMFIAT VFFWAGRHRY VHMPPEPKNP NGFLPVIKTA LLSPGANRFG LALALMGTVL
AVIALGFMPS LGLVTSLCLA LVLLMGFVGS GASMQLDRAR ARHGDEAVEG VRAVMRILVL
FALVTPFWSL FDQKASTWIL QANEMTKPEW FEPAMMQALN PLLVMILIPF NNFVLYPTLE
RWGFRLTALG KMASGIAFSG LSWVVIGSIQ LMMDGGSAVS IVWQVLPYAL LTFGEVLVSA
TGLEFAYSQA PKTMKGTIMS FWTLSVTVGN LWVLLANASV KGQGMTDWIA GTGLSVTAFQ
MFFFAGFALV AAAVFALYAR NYRMQDHYRE AAQVSAV
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