| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2410 |
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| Symbol | |
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| ID | 4604659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2896638 |
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| End bp | 2897360 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781807 |
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| Product | hypothetical protein |
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| Protein accession | YP_928284 |
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| Protein GI | 119775544 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.895374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGAG CATATCAAAA CCGCAAAGAA TCCATGGCGA AAACCGCCAC TCAGAAGACC
AGGATTTATT CACGCTACGG GAAAGAAATC TACGTGTGCG CCAAGAGTGG CGGCGTTGAC
CCCGATGGCA ACCTGTCACT GCGTCGTCTG ATCGATCGCG CCAAGAAAGA TCAGGTACCG
GCTCACGTGA TTGAGCGTGC CATCGACAAA GCCAAGGGTG GCGGTGGAGA AGACTATGAT
ACTGCCCGCT ATGAAGGTTT TGGCCCGGGT AACTGTATGG TGATTGTTGA CTGCTTGACC
GACAACGGTA AGCGCACCTT TACCGAAGTA CGTCAGGCCT TTGTGAAAAA CGATGCCAAG
CTGGGCGGTC CGGGCACTGT GGCCCATATG TTTGACCACC AGGCCGTGTT TGTATTTGCC
GGTGATAACG ACGAAGAAAT TCTCGAAATC CTGATGGCGG CCGATGTGGA CGTGAGTGAT
GTGGAAAGCG AAGACGGCAT GATAAGCGTC TATGCACCAC ACACCGAATT CTTCAAGGCC
AAAAATGCCC TTACCGATGC CATGCCCGAC GTCAACTTTG AAGTCGAAGA AATCAGCTTC
GTACCTCAAA CACAAACCGA TGTCAGCGGT GAAGATGTAG CGACATTCGA CAAGTTTATC
GCTGCCCTGG AAGATTGTGA CGACGTGCAG AACGTTTACC ACAACGCCAA TATCATCGAG
TAA
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| Protein sequence | MGRAYQNRKE SMAKTATQKT RIYSRYGKEI YVCAKSGGVD PDGNLSLRRL IDRAKKDQVP
AHVIERAIDK AKGGGGEDYD TARYEGFGPG NCMVIVDCLT DNGKRTFTEV RQAFVKNDAK
LGGPGTVAHM FDHQAVFVFA GDNDEEILEI LMAADVDVSD VESEDGMISV YAPHTEFFKA
KNALTDAMPD VNFEVEEISF VPQTQTDVSG EDVATFDKFI AALEDCDDVQ NVYHNANIIE
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