| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2400 |
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| Symbol | |
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| ID | 4604649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2882839 |
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| End bp | 2884665 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781797 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_928274 |
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| Protein GI | 119775534 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.774596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.752012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG CATGGCGGCT TTTATTAATG TTGGCGTTGC TGCCAGTGGC GATGGCCTTT
GCAGGGGGGG CAGCTGACGA ACACGTTCAG GGCAAACAGG AGGTGCGTAT TGGCATTCTG
ACCTTCGCCG AGCGCTCGGA CACCCTGAAT ACCTGGCAGG CCACCGCAGA TTATCTTGCC
CGGCAGACAG GACATGCCAT CCGCATCGAA CCGCTGACAC CATCGGAGCT TGATAGGCAG
GTCAAGGCCC GGGCGCTGGA CTTTATTATC TCCAACCAGT TTGTGGCTGT GGGGTACAAA
AAAGACTGGG GCGCCAGTCA ATTACTGACC CTTATTCCCG CTGACGGCCG GGATCCCGCC
CGAGCCATGG GCTCGGCGCT GGTGGTGCGC GCAGGTGTTT CGGTTACCCG TTGGCAGCAG
CTTACCGATC TCAAGATTGT GTCCACTGAT CCCCGGGCCT TTGGTGGCTT TCTGATTTTT
GCCGGTGAGA TGGTGAGGCG CGGATTGGAC CCCGTCAGGG ATTTACCTGG ACTCAGCTTT
GCAGGGTTTC CTCAGACCAA GCTGTTGCAA AAGCTCTGGC TGAACGAGGC TGATATGGCC
ATTTTGCCCG CCTGCGTATT GGAGCAGGCC ATTGCCCGGG GCGAGTACCC GCAGGGGGCA
TTTGATATTG CTTTGGCCAA AGCAACGTCC GGATTTGCCT GTGGTGTCTC GAGTGAACTC
TATCCCTATA CCACATTATC CAAGCTTGGC CACACCCAAA GTGCCCTGGC AACCGAGGTG
GCCAGGGCGT TGCTGTCGAT GGAGGCCAAT ACAGCGGCGG CCATCAGTGG CGGCTATCGC
GGCTGGTCTG TGCCGGTTAA CGATAATCGG GTGTTTGCGC TCAAACACAC ATTGAGAGAA
TGGCCGTTTC AAACCAACTG GCAGCGCGTC GCCTCTGCCG CCATGCCCTG GTTTGGGGCC
ATAGTTCTGT GCTTGCTCCT TGGGTATCTG CATCACCTGC GGATAAAGCG GCTGGTGGTG
AAACGTACCC GGGCACTGGA AACGGAGATT GAGCAGCATC GCGAGACCCA GCGGGCCTTT
AACGAGCAGC AGCGTCAGTT TTATCGCGCT CAGCGGGTGC TGCTCACCGG AGAGATGGCG
TCGGGGATCT CCCATGAGCT GAAGCAACCG CTGGCGGGGA TCCGTTATCT GGCCCAGGGC
TGCCTGTATC GGCTTAAAGA TAATGAACCC GAGATAGCAT CGGCCCTTGG CGGGGTACTG
ACACAGGTCG ATAGGGCTCA GGAAACCATC AGCCGCCTGC GAAGTTTCTG TCAGCAGCCC
AGTCGCAGTG TGCCCTATCG GGTGGATACC CTGATTGAAG AGACCCTGGC ACTGATCTCC
CCGGAGCTTA AACGGTTGAA ACTTGAACCC TCATTGGCGC TGACTGAGGT CGAGGCCAGG
CTGGACCCCG GGCTTATGAC TCAGGTGTTG GTGAATGTAT TGCTCAATGC GCTGGATGCC
ATGGCCGGAC AGCCCACGCC GTGGCTTGGT ATTGCTCTTG AGGCCAAAGA CTCAGATTAC
CTTATCCGGG TCTCTGACAA TGGCTGTGGG TTAACTGAGG CGCAGCTTTC CAGGCTGTTT
TTCCCATTTG AGTCGGCCAA GGCCGATGGA TTGGGTTTGG GCATGGTTAT TTGCAAACGT
ATCGTCGAAG AGCATGGGGG CAAAATTTCG GCCCAGAATC GTTTTCATCA CTCCGCAATC
GAGGGCCAAA TCTATGCCCC CATTCACAGC AGCCCCTGTG GGCTGGAAAT ATGCATAGAG
ATGCCCCGGG GAGCCGCTCA TGATTGA
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| Protein sequence | MSKAWRLLLM LALLPVAMAF AGGAADEHVQ GKQEVRIGIL TFAERSDTLN TWQATADYLA
RQTGHAIRIE PLTPSELDRQ VKARALDFII SNQFVAVGYK KDWGASQLLT LIPADGRDPA
RAMGSALVVR AGVSVTRWQQ LTDLKIVSTD PRAFGGFLIF AGEMVRRGLD PVRDLPGLSF
AGFPQTKLLQ KLWLNEADMA ILPACVLEQA IARGEYPQGA FDIALAKATS GFACGVSSEL
YPYTTLSKLG HTQSALATEV ARALLSMEAN TAAAISGGYR GWSVPVNDNR VFALKHTLRE
WPFQTNWQRV ASAAMPWFGA IVLCLLLGYL HHLRIKRLVV KRTRALETEI EQHRETQRAF
NEQQRQFYRA QRVLLTGEMA SGISHELKQP LAGIRYLAQG CLYRLKDNEP EIASALGGVL
TQVDRAQETI SRLRSFCQQP SRSVPYRVDT LIEETLALIS PELKRLKLEP SLALTEVEAR
LDPGLMTQVL VNVLLNALDA MAGQPTPWLG IALEAKDSDY LIRVSDNGCG LTEAQLSRLF
FPFESAKADG LGLGMVICKR IVEEHGGKIS AQNRFHHSAI EGQIYAPIHS SPCGLEICIE
MPRGAAHD
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