Gene Sama_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2398 
Symbol 
ID4604647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2881844 
End bp2882125 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content52% 
IMG OID639781795 
Producthypothetical protein 
Protein accessionYP_928272 
Protein GI119775532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.75412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.60686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG TTTATTTACC CAAGACGATG ATTATGACCG ATACCAAAGT ACCGCCGGCA 
CTGCCAGACA GACTCTCAAT CGATCCACGC AGCCCACACC ATGTGGCAGA AGTGTTTGAA
CATGACGTGG GTATTCGCAT CAACGGCAAA GAGCGTAATG ACGTTGAAGA ATACTGCATC
AGCGAAGGCT GGATTAAGGT CGCCTCCCGC AAGGCCCTCG ACCGCCGTGG TCAGCCACTG
CTGATGACCA TCAAGGGCGA AGTGGAAGCT TTCTATAAGT AA
 
Protein sequence
MAQVYLPKTM IMTDTKVPPA LPDRLSIDPR SPHHVAEVFE HDVGIRINGK ERNDVEEYCI 
SEGWIKVASR KALDRRGQPL LMTIKGEVEA FYK