Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2395 |
Symbol | |
ID | 4604644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2878443 |
End bp | 2879168 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639781792 |
Product | hypothetical protein |
Protein accession | YP_928269 |
Protein GI | 119775529 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.253826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.415458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACCG CTGGAATCCG TGTGCGCCTC ATTTCGTCTG TGTTCTTGCT TGGGCTGGCG TTTGCGTCCC AATCTGACGT TGCACCAGGT GGTACAGCAA GAACACTGGC GGTTATCGCC TTGGAATATC CACCGTTCAC GACGGAAACA CAGGCAGATA AAGGCAGCAG TTTCAGAATG TTGCAAAAGT ATTTGCTCTC AAACCAACTT GAATTTGAGC TCCAACCCCT GTTCCTGCCC TCAGCGCGTG CACAGAGCGA AATTATTGCG GGTAACTGGT GTGCATCATT TTATCCCCCT CCGGATATTG TTAAGGAACA GTCCCGCTTT TTACTGTTGT CCGATGAAAT TGTTTCTATT GGCATTTATC GCCGACGTCA GCCCGAGCCT TTTGTCTGGA CGGACTTATC TGAGTTGGGA GGGGGAAAAA TTGCCTTACT TCGCTCAAGA GTTGATGGAG GCTTTTTACA ACAATTCACT GATGCGGGTC TCACTATTGA GTTTGTCAGC GATGTTGCGA CCGGATTAAG GATGCTCAAT AAAGGGCGTG TTGACTATGC GTTTGGAGAC AGTGACGCAA TAAGTGTACT CACCTTACCA AAAGCGATGC GGGAAAATCT GCAGTTTTCT TCCACCCACC TGATGGAAGT GCCTGTCGGG GTGTTCGTCA ACCCAATGTG TCCAGAGGCC GTTGCCGTTC TGGAGACAGT GCCAGCCTCT GACTGA
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Protein sequence | MKTAGIRVRL ISSVFLLGLA FASQSDVAPG GTARTLAVIA LEYPPFTTET QADKGSSFRM LQKYLLSNQL EFELQPLFLP SARAQSEIIA GNWCASFYPP PDIVKEQSRF LLLSDEIVSI GIYRRRQPEP FVWTDLSELG GGKIALLRSR VDGGFLQQFT DAGLTIEFVS DVATGLRMLN KGRVDYAFGD SDAISVLTLP KAMRENLQFS STHLMEVPVG VFVNPMCPEA VAVLETVPAS D
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