| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2381 |
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| Symbol | |
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| ID | 4604630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2859826 |
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| End bp | 2861457 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781778 |
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| Product | malate synthase |
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| Protein accession | YP_928255 |
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| Protein GI | 119775515 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.653743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC AAATGATGGA GCAGCCACAG ACACTGACCG GGCTCAAGCT GGCGGGTCAT
CATATCCAGG GGCAGGAAGA AGTCTTTACT GAAGGCGCAA TGTCGCTGCT TGAGTCCCTG
TGTGCCAGGT TTGCAGGCGA CGTGGATGCC TTACTGGCTA AACGTAAAGA ACGCCAGGTT
CGCATTGATA AAGGTGAGTT GCCGGATTTC CTGCCGGAGA CACGCGCCAT ACGTGATGGT
AAGTGGACCA TTCGTGGCAT ACCAACCGAC TTGCAGGATC GCCGGGTGGA AATCACTGGT
CCCGTGGACC GCAAGATGAT CATCAATGCC CTGAATGCCG ATGTGAAAGT CTTTATGGCT
GACTTTGAGG ATTCATTGGC ACCCAGCTGG GAAAAGGTGA TTCAGGGGCA AATCAACCTG
CGTGATGCGG TGCGTGGCAC CATTGAATAT AAAGCGCCCG ATACAGGTAA AGAGTACCGC
TTGAACGATA ATCCAGCGGT GCTGATTGCC AGGGTGCGCG GCTTACACCT CAAAGAAAAA
CACGTGGAAT TTAACGGCCA ATCGATCCCG GGAGCCCTGT TTGATTTCTG TTTCTACTTT
TATCACAACT ACCGTCAGTT ACTGAGTAAA GGCAGTGGGC CGTACTTTTA TATCCCCAAG
CTCGAGAGCC ATCTCGAGGC GCGTTGGTGG GCCAAGGTCT TTGCCTTTAC CGAAGAGCGT
TTCTGCCTCG AGCCGGGCAC AATCAAGTGT ACCTGTTTGA TAGAAACCCT GCCGGCCGTG
TTTGAAATGG ACGAAATCCT CTATGAGCTG CGCTCCAATA TCGTTGCGCT CAACTGTGGT
CGATGGGATT ACATCTTCAG CTATATCAAA ACCTTGAAAC ACCACAGTGA TCGCGTACTG
CCTGACAGGC AACAAGTCAC CATGGATAAG CCGTTCCTCA GCGCCTATTC GCGTCTGCTG
ATCAAAACTT GTCACAAGCG GGGAGCCCTT GCGATGGGCG GTATGGCGGC TTTCATTCCA
GCCAAAGATG CCGAAGCCAA CCGCCTGGTG CTTGAACGGG TTTGCAAAGA CAAGGAGCTG
GAAGCCCGTA ACGGCCATGA CGGCACCTGG GTCGCCCATC CCGGTCTGGC ACAAACGGCG
ATGGCCGTGT TTAACCAGTT TATCGGTGAT GACCACTGCA ATCAGCTGCA CATCACCCGT
GATGTGGATG CGCCGATTTT GGCCAGCGAG CTGCTGGCGC CCTGCGAGGG TGAGCGCACC
GAGCACGGTA TGCGACTGAA TATTCGCATT GCGCTGCAGT ACATCGAGGC CTGGATCAGT
GGCAATGGTT GTGTGCCCAT TTATGGTCTG ATGGAAGATG CCGCCACGGC GGAAATCTCC
CGCGCCTCCA TCTGGCAATG GATCCATCAT CAGAAGCACC TATCCAACGG CAAACTTGTG
ACCAAGGCAC TGCTGAAGGA AATGCTGGTG GAGGAGCTTG CCAACGTCAA AGAAGAAGTG
GGCAGCGAGC GCTTTACCCA CGGCAGATTT ACCCAAGCGG CTGTGCTGCT GGAGGAGATC
ACGACCGCCG ACGAGCTGGT CGACTTCCTG ACACTGCCGG GCTACGAGCT GCTGACCAAA
CAAGAACACT GA
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| Protein sequence | MTEQMMEQPQ TLTGLKLAGH HIQGQEEVFT EGAMSLLESL CARFAGDVDA LLAKRKERQV
RIDKGELPDF LPETRAIRDG KWTIRGIPTD LQDRRVEITG PVDRKMIINA LNADVKVFMA
DFEDSLAPSW EKVIQGQINL RDAVRGTIEY KAPDTGKEYR LNDNPAVLIA RVRGLHLKEK
HVEFNGQSIP GALFDFCFYF YHNYRQLLSK GSGPYFYIPK LESHLEARWW AKVFAFTEER
FCLEPGTIKC TCLIETLPAV FEMDEILYEL RSNIVALNCG RWDYIFSYIK TLKHHSDRVL
PDRQQVTMDK PFLSAYSRLL IKTCHKRGAL AMGGMAAFIP AKDAEANRLV LERVCKDKEL
EARNGHDGTW VAHPGLAQTA MAVFNQFIGD DHCNQLHITR DVDAPILASE LLAPCEGERT
EHGMRLNIRI ALQYIEAWIS GNGCVPIYGL MEDAATAEIS RASIWQWIHH QKHLSNGKLV
TKALLKEMLV EELANVKEEV GSERFTHGRF TQAAVLLEEI TTADELVDFL TLPGYELLTK
QEH
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