| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2380 |
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| Symbol | |
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| ID | 4604629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2858428 |
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| End bp | 2859747 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781777 |
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| Product | isocitrate lyase |
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| Protein accession | YP_928254 |
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| Protein GI | 119775514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.399534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGT ACATCAGCCG CCAGGAACAA ATTGACGCAC TGAAAAAGGA CTGGGCCGAA
AACCCACGCT GGAAAGGTGT GCGCCGTCCT TATACTGCCG AAGAAGTGGT TTCGCTGCGC
GGCTCTTTTG TACCGGAGAA TACAGTGGCC CAGCGCGGCG CAGCCAAACT GTGGGACCTG
GTCAACGGTG GTGCCAAAAA AGGTTATGTA AACTCCCTCG GTGCCCTGAC CGGTGGTCAG
GCGGTACAGC AGGCCAAGGC CGGCATTGAA GCTATCTATT TGTCTGGCTG GCAGGTAGCC
GCCGATGCCA ACCTGGCCGG TACCATGTAC CCAGACCAAT CTCTGTACCC CGCCAACTCT
GTGCCTGCTG TGGTTGGTCG TATCAATAAC TCATTCCGCC GCGCCGACCA GATCCAATGG
AGCAACGGCG TAGGTCCGGA AGATGACAAG TTCGTTGATT ACTTCCTGCC AATCGTGGCG
GATGCCGAAG CCGGCTTTGG TGGTGTACTC AATGCTTACG AGTTGATGAA GTCTATGATT
GATGCCGGTG CCGCCGGTGT GCACTTTGAA GATCAGCTGG CATCGGTAAA GAAATGCGGT
CACATGGGCG GCAAAGTGTT GGTGCCCACT CAGGAAGCGG TACAAAAACT GGTTGCGGCC
CGTTTGGCGG CTGACGTATC TGGCGTAGAG ACTCTGGTTA TTGCCCGTAC CGACGCCAAT
GCTGCCGATC TGCTGACCTC GGATTGCGAC CCATACGACA GCGACTTCAT CACAGGTGAG
CGTACCAGCG AAGGTTTCTA CCGTGTCCGT GCCGGTCTGG ACCAGGCCAT CGCCCGTGGT
TTGGCTTACG CTCCATACGC CGACCTCATC TGGTGTGAAA CTGCCAAGCC GGACCTGGAA
GAAGCCCGCC GCTTCGCCGA GGCCATCCAT GCCAAGTACC CGGATCAGCT GCTGGCCTAT
AACTGCTCAC CTTCTTTCAA CTGGAAGAAG AATCTGGACG ACGCCACTAT CGCCAAGTTC
CAGCAGGCCT TGTCTGACAT GGGCTACAAG TATCAGTTCA TCACCCTGGC CGGTATCCAC
AATATGTGGT TCAACATGTT CGACCTGGCG TACGACTACG CCCGCGGTGA AGGCATGAAG
CACTATGTAG AGAAGGTGCA GGAAGCCGAG TTTGCTGCCG CCAGTAAGGG ATATACCTTT
GTGGCGCACC AGCAGGAAGT GGGCACCGGC TACTTCGACA AGATGACCAA TATCATTCAG
GGCGGTGCCT CTTCTGTGAC TGCACTGACC GGTTCCACTG AGGAAGAACA GTTCCACTGA
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| Protein sequence | MSKYISRQEQ IDALKKDWAE NPRWKGVRRP YTAEEVVSLR GSFVPENTVA QRGAAKLWDL
VNGGAKKGYV NSLGALTGGQ AVQQAKAGIE AIYLSGWQVA ADANLAGTMY PDQSLYPANS
VPAVVGRINN SFRRADQIQW SNGVGPEDDK FVDYFLPIVA DAEAGFGGVL NAYELMKSMI
DAGAAGVHFE DQLASVKKCG HMGGKVLVPT QEAVQKLVAA RLAADVSGVE TLVIARTDAN
AADLLTSDCD PYDSDFITGE RTSEGFYRVR AGLDQAIARG LAYAPYADLI WCETAKPDLE
EARRFAEAIH AKYPDQLLAY NCSPSFNWKK NLDDATIAKF QQALSDMGYK YQFITLAGIH
NMWFNMFDLA YDYARGEGMK HYVEKVQEAE FAAASKGYTF VAHQQEVGTG YFDKMTNIIQ
GGASSVTALT GSTEEEQFH
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