| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2369 |
|---|
| Symbol | |
|---|
| ID | 4604618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2846327 |
|---|
| End bp | 2847397 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639781766 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928243 |
|---|
| Protein GI | 119775503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.458769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.36477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACCC TCATTATTAT CATACTCGTT GCCGTGGGCG TTTCCTTTCT GTGCAGCGTG
TTCGAAGCCG TGCTTCTGTC TGTGACTCCC AGTTATATCG CCTCACTGGA CGAAAATAAT
CCTGCCGCAG CCAGCCGCCT GCGCGCTCAA AAAGACAATG TTGAAGCACC GCTGGTTGCC
ATCCTGACGC TAAATACCAT TTCCCATACC GTAGGTGCGG CCGTGGCTGG TGCTCAGGCC
GCCCATGTAT TTGGTGACCA CATGCTCGGA GTATTTTCGG CAGTGCTTAC CTTTATTATT
CTGTTCTTCT CCGAGATCAT CCCCAAAACC CTGGGTGCCA ACTACTGGCG CACCCTGGCA
CCGTCAGTCA GCCTCGCACT GCTGTGGATG GAACGCGCCA CCAAGCCGCT TATCTGGATG
TCGCAGCAGG TCACCAAACT CTTGGGTAAG GGCGAAGAAG GCCAATACAT TCGCCAGGAA
ATGAGTGCCA TGGCGCGCAT GGGACACGAG TCCGGTGAAT TGGATGCCCA GGAATCCCGC
ATTCTGACGC AAATTCTGTC GGTAAAAGAA ATGCCGGTCA CCAGCATCAT GACACCCAGA
ACCGTGATGT TCTCCGTGCC CATGTCCATG ACATTGGAAG ACTTTGCCGG CAAGCATATG
GCCAAGCCCT TCAGTCGTCT GCCGGTATTT GGCGAAGATA ACGATGACAT TCAGGGTTTT
GTAAACCGTA CAGATATTTT GCTCGGGGTA CGTGATAATC CCCAAAACAC CATGGCCAGC
CTCAAGCGCA ATCTGCTGGC GGTGCCCGAA ACGGCCAAAA TTCTGCCATT GCTTGAGCTG
ATGATTAAGC GCAATACCCA GATTGCTGTG GTGGTGGATG AATATGGCTC GGCGCAGGGC
CTGGTAACCC AGGAAGACAT TATCGAGTCC ATGCTCGGAC TGGAGATTGT TGACCTGAAC
GACCCGGCCA TCGATATGCA GCGTCTTGCA AGGCAATTAT GGAAGAGACG CATCAAGGAG
AAAGGCATTC GACTGTCAGA TGACCAGGAC GGAGACCTTC ACTCATTCTG A
|
|---|
| Protein sequence | MVTLIIIILV AVGVSFLCSV FEAVLLSVTP SYIASLDENN PAAASRLRAQ KDNVEAPLVA
ILTLNTISHT VGAAVAGAQA AHVFGDHMLG VFSAVLTFII LFFSEIIPKT LGANYWRTLA
PSVSLALLWM ERATKPLIWM SQQVTKLLGK GEEGQYIRQE MSAMARMGHE SGELDAQESR
ILTQILSVKE MPVTSIMTPR TVMFSVPMSM TLEDFAGKHM AKPFSRLPVF GEDNDDIQGF
VNRTDILLGV RDNPQNTMAS LKRNLLAVPE TAKILPLLEL MIKRNTQIAV VVDEYGSAQG
LVTQEDIIES MLGLEIVDLN DPAIDMQRLA RQLWKRRIKE KGIRLSDDQD GDLHSF
|
|---|
| |