| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2367 |
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| Symbol | |
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| ID | 4604616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2844237 |
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| End bp | 2845025 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781764 |
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| Product | fimbrial biogenesis and twitching motility protein, putative |
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| Protein accession | YP_928241 |
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| Protein GI | 119775501 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000700104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.549255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCAAG GATTGCCTTC TTTAACCCTG ATCGCCATCC TGTCCGGACT GGTGACGGGC
TGCGTTACCG AACAAACCTA CTCAGGTACA GATATTCCTG TGTCCGAGCG CACCTTCGAT
AAGGTGGCGG CGGCAAAAGA GCGTACCCAG TTGGGGCTGA CCTATTTACA ACGTGGCAAT
ACAGAACAAG CCAAATTCAA CCTCGATAAA GCCATGGCCT ACGCACCGCA CCTTGAAGAA
GTGCATGTGG CCATGGCCTA TTTCTATCAG ACAGTAGGAG ACGTTCCCCG CACTGAAGAG
GCCTACCGCA ATGCTGTGCG TTCCAATGAC GCCAGCGGTG ACTCTATGAA TAACTTTGGG
GTGTTTCTGT GCCAGCAAAA GCGCTACGGC GAAGCCGAAG AAATGTTTTT AAAGGCCATT
AACCAACCCA AGTACACTCG CACTGCATCC AGCTATGAAA ATCTGGGCCT TTGCAGCCGC
GATGCGGGAC AGATAGAAAA AGCGCGACAC TACTTTGATA TGGCGCTAAA GTATGACCCT
CGGCGAGCCA CCTCACTGCT GGAAATGACC GAAATTGCCA TGGATAGCAA GGATTTCCAG
GGAGCCAAAA GAATGCTGGA GCGTTTGCAT TCGGTTATCC CTGAGTCGGC TTCCAGTCTC
GCCCTGGGTG TAGAAATCGA ACGCCAACTG AATAATCGAG ATGCCAGCAG CCGATATGGC
ATTATGCTGT TGGCGAAATT TCCCGCTTCA CCAGAAGCCA AAGAATATCG GGCCAGTTTG
AATCAATGA
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| Protein sequence | MKQGLPSLTL IAILSGLVTG CVTEQTYSGT DIPVSERTFD KVAAAKERTQ LGLTYLQRGN
TEQAKFNLDK AMAYAPHLEE VHVAMAYFYQ TVGDVPRTEE AYRNAVRSND ASGDSMNNFG
VFLCQQKRYG EAEEMFLKAI NQPKYTRTAS SYENLGLCSR DAGQIEKARH YFDMALKYDP
RRATSLLEMT EIAMDSKDFQ GAKRMLERLH SVIPESASSL ALGVEIERQL NNRDASSRYG
IMLLAKFPAS PEAKEYRASL NQ
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